RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 DAPK3O43293 454 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 RASA4O43374 803 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 SIGLEC6O43699 453 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 SDC3O75056 442 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 PIAS2O75928 621 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 TM7SF2O76062 418 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 TMCC1O94876 653 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 CSF2P04141 144 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 UGT2B4P06133 528 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 GP1BAP07359 652 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 MYBL1P10243 752 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 NME1P15531 152 aaKnown RBP11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 XPAP23025 273 aaPredicted RBP11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 PSMA2P25787 234 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 ZNF165P49910 485 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 CLDN2P57739 230 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 TPI1P60174 286 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 RHOAP61586 193 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 YPEL5P62699 121 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 TPM4P67936 248 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 CYP4F3Q08477 520 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 ELP6Q0PNE2 266 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 DNAJC3Q13217 504 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 SERINC3Q13530 473 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 ASIC2Q16515 512 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 ERMARDQ5T6L9 678 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 PLEKHA7Q6IQ23 1121 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 GCNT7Q6ZNI0 430 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 PTAR1Q7Z6K3 402 aaPredicted RBP11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 PARGQ86W56 976 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 DNAAF5Q86Y56 855 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 FAM181AQ8N9Y4 354 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 MDM1Q8TC05 714 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 BAP1Q92560 729 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 BMFQ96LC9 184 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 ZNF641Q96N77 438 aaPredicted RBP11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 KLHL32Q96NJ5 620 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 MYOCQ99972 504 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 GPR27Q9NS67 375 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 LHX6Q9UPM6 363 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 BZW2Q9Y6E2 419 aaKnown RBP11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 FRYQ5TBA9 3013 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 ASPMQ8IZT6 3477 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 FAM149AA5PLN7 773 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 TMEM191CA6NGB0 347 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 ARHGAP42A6NI28 874 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 LRRC53A6NM62 1247 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 TMEM110-MUSTN1A8MSY1 372 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 RNF103O00237 685 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 TRIM38O00635 465 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 TPP1O14773 563 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 AREL1O15033 823 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 PRPSAP2O60256 369 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 CKMT1AP12532 417 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 PRKCIP41743 596 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 CSNK1DP48730 415 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 HCAR3P49019 387 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 THOP1P52888 689 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 FGL2Q14314 439 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 RFTN1Q14699 578 aaPredicted RBP11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 ACAP1Q15027 740 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 HES3Q5TGS1 186 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 ERAP2Q6P179 960 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 SLC22A18ASQ8N1D0 253 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 PYROXD2Q8N2H3 581 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 LZTR1Q8N653 840 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 OR6K2Q8NGY2 324 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 CXorf40AQ8TE69 158 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 GLMNQ92990 594 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 CENPTQ96BT3 561 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 IQCDQ96DY2 449 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 HMCESQ96FZ2 354 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 TBATAQ96M53 351 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 TUBGCP5Q96RT8 1024 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 KLF6Q99612 283 aaPredicted RBP11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 SYT11Q9BT88 431 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 MAGEB5Q9BZ81 275 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 HAUS4Q9H6D7 363 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 NOL6Q9H6R4 1146 aaKnown RBP11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 FZD3Q9NPG1 666 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 DNAJC28Q9NX36 388 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 TMEM63CQ9P1W3 806 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 SPASTQ9UBP0 616 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 UBA2Q9UBT2 640 aaPredicted RBP11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 CLCA2Q9UQC9 943 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 GPSM3Q9Y4H4 160 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 ACTL7AQ9Y615 435 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 SCINQ9Y6U3 715 aa11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 COL5A1P20908 1838 aaPredicted RBP11.02□□□□□ -0.65
VTI1BP3-201ENST00000550220 PKD1L2Q7Z442 2459 aa11.01□□□□□ -0.65
VTI1BP3-201ENST00000550220 URB1O60287 2271 aaKnown RBP11.01□□□□□ -0.65
VTI1BP3-201ENST00000550220 APC2O95996 2303 aa11.01□□□□□ -0.65
VTI1BP3-201ENST00000550220 A0A1B0GTH6 734 aa11.01□□□□□ -0.65
VTI1BP3-201ENST00000550220 CFAP69A5D8W1 941 aa11.01□□□□□ -0.65
VTI1BP3-201ENST00000550220 POM121BA6NF01 834 aa11.01□□□□□ -0.65
VTI1BP3-201ENST00000550220 TMCO5BA8MYB1 307 aa11.01□□□□□ -0.65
VTI1BP3-201ENST00000550220 EEF2KO00418 725 aaKnown RBP11.01□□□□□ -0.65
VTI1BP3-201ENST00000550220 TEX33O43247 280 aa11.01□□□□□ -0.65
VTI1BP3-201ENST00000550220 PRAMEF11O60813 436 aa11.01□□□□□ -0.65
VTI1BP3-201ENST00000550220 SERPINC1P01008 464 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms