RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 LMX1AQ8TE12 382 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 VOPP1Q96AW1 172 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 CCNL2Q96S94 520 aaPredicted RBP10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 CRACR2AQ9BSW2 395 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 ZYG11BQ9C0D3 744 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 HECAQ9UBI9 543 aaPredicted RBP10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 PPARGC1AQ9UBK2 798 aaKnown RBP10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 SNX10Q9Y5X0 201 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 C16orf96A6NNT2 1141 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 TMX2-CTNND1H3BSU7 103 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 NTN3O00634 580 aaPredicted RBP10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 MUSKO15146 869 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 YY2O15391 372 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 SRGAP2O75044 1071 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 TNFSF15O95150 251 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 POP4O95707 220 aaKnown RBP10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 ITGA2BP08514 1039 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 ADKP55263 362 aaKnown RBP10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 STX17P56962 302 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 BPIFB4P59827 614 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 RNASE9P60153 205 aaKnown RBP10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 EXOC3L4Q17RC7 722 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 C6orf132Q5T0Z8 1188 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 LVRNQ6Q4G3 990 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 PARS2Q7L3T8 475 aaKnown RBP10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 ARCQ7LC44 396 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 SLC47A2Q86VL8 602 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 SLC35F3Q8IY50 421 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 FAM71AQ8IYT1 594 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 SDR16C5Q8N3Y7 309 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 TMEM35BQ8NCS4 154 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 C18orf8Q96DM3 657 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 ARHGEF26Q96DR7 871 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 LIN37Q96GY3 246 aaPredicted RBP10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 TBCBQ99426 244 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 SYNCQ9H7C4 482 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 ATP13A1Q9HD20 1204 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 ACSL6Q9UKU0 697 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 ATXN7L1Q9ULK2 861 aaPredicted RBP10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 PADI4Q9UM07 663 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 CTNND2Q9UQB3 1225 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 PCDHGA7Q9Y5G6 932 aa10.01□□□□□ -0.81
TRAFD1-207ENST00000550051 CYSRT1A8MQ03 144 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 NEMP1O14524 444 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 AREL1O15033 823 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 ANXA6P08133 673 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 ETFBP38117 255 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 ABL2P42684 1182 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 SULT1E1P49888 294 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 CSRP3P50461 194 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 PEX5P50542 639 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 DNA2P51530 1060 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 THOP1P52888 689 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 PDX1P52945 283 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 GEMIN4P57678 1058 aaKnown RBP10□□□□□ -0.81
TRAFD1-207ENST00000550051 NRG1Q02297 640 aaPredicted RBP10□□□□□ -0.81
TRAFD1-207ENST00000550051 APBA1Q02410 837 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 EIF3IQ13347 325 aaKnown RBP10□□□□□ -0.81
TRAFD1-207ENST00000550051 MYLK3Q32MK0 819 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 PRRT3Q5FWE3 981 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 FAXCQ5TGI0 409 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 KIAA1614Q5VZ46 1190 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 ESRP1Q6NXG1 681 aaKnown RBP10□□□□□ -0.81
TRAFD1-207ENST00000550051 PHACTR4Q8IZ21 702 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 EXD3Q8N9H8 876 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 EPAS1Q99814 870 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 CCDC3Q9BQI4 270 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 OSBPL1AQ9BXW6 950 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 SLC13A1Q9BZW2 595 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 CLPBQ9H078 707 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 TCEAL2Q9H3H9 227 aaPredicted RBP10□□□□□ -0.81
TRAFD1-207ENST00000550051 SIX2Q9NPC8 291 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 TMPRSS4Q9NRS4 437 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 APOBEC3BQ9UH17 382 aaKnown RBP10□□□□□ -0.81
TRAFD1-207ENST00000550051 RWDD2AQ9UIY3 292 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 TMEM59LQ9UK28 342 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 DNAJC12Q9UKB3 198 aa10□□□□□ -0.81
TRAFD1-207ENST00000550051 PNMA8BQ9ULN7 279 aaPredicted RBP10□□□□□ -0.81
TRAFD1-207ENST00000550051 FCF1Q9Y324 198 aaKnown RBP10□□□□□ -0.81
TRAFD1-207ENST00000550051 PMS2P1A4D2B8 440 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 TMEM110-MUSTN1A8MSY1 372 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 BIN1O00499 593 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 PLD2O14939 933 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 NVLO15381 856 aaKnown RBP9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 SLC28A2O43868 658 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 NOBOXO60393 691 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 GJB6O95452 261 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 GSRP00390 522 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 TSHRP16473 764 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 EIF4A3P38919 411 aaKnown RBP9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 BLKP51451 505 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 INHBCP55103 352 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 SNRPD1P62314 119 aaKnown RBP9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 PPARDQ03181 441 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 C1orf61Q13536 156 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 SPIDRQ14159 915 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 POLD3Q15054 466 aaPredicted RBP9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 TSR1Q2NL82 804 aaKnown RBP9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 LINC00303Q3SY05 128 aa9.99□□□□□ -0.81
TRAFD1-207ENST00000550051 DPY19L2P1Q6NXN4 242 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms