RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 IDH3AP50213 366 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 ZNF200P98182 395 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 BTKQ06187 659 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PSMD5Q16401 504 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 KIZQ2M2Z5 673 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 SLC4A8Q2Y0W8 1093 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TMEM196Q5HYL7 178 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 CC2D1AQ6P1N0 951 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 HACD2Q6Y1H2 254 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 IFT20Q8IY31 132 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 UBALD2Q8IYN6 164 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 CPSF7Q8N684 471 aaKnown RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 RNF169Q8NCN4 708 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 DBF4BQ8NFT6 615 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 RNF138Q8WVD3 245 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 ULK4Q96C45 1275 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 OXNAD1Q96HP4 312 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 ZYG11BQ9C0D3 744 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 SNX25Q9H3E2 840 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 THAP10Q9P2Z0 257 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PUF60Q9UHX1 559 aaKnown RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 AAR2Q9Y312 384 aaKnown RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TTLL3Q9Y4R7 772 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 MN1Q10571 1320 aaPredicted RBP4.96□□□□□ -1.61
SCAF11-212ENST00000549162 ZFC3H1O60293 1989 aaKnown RBP4.96□□□□□ -1.61
SCAF11-212ENST00000549162 A0A1W2PP55 124 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 PROB1E7EW31 1015 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 TGFBR3LH3BV60 316 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 MATN2O00339 956 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 GPR39O43194 453 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 LATO43561 262 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 SNNO75324 88 aaPredicted RBP4.96□□□□□ -1.61
SCAF11-212ENST00000549162 FGF18O76093 207 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 CNTN5O94779 1100 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 SEC24AO95486 1093 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 PTPN2P17706 415 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 HTR3AP46098 478 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 HARS2P49590 506 aaKnown RBP4.96□□□□□ -1.61
SCAF11-212ENST00000549162 CYP2J2P51589 502 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 PNLIPRP1P54315 467 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 GABPB1Q06547 395 aaPredicted RBP4.96□□□□□ -1.61
SCAF11-212ENST00000549162 CEBPEQ15744 281 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 ARL13BQ3SXY8 428 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 FBXO43Q4G163 708 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 CCDC38Q502W7 563 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 PRAMEF19Q5SWL8 479 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 ICE2Q659A1 982 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 ITPRIPL1Q6GPH6 555 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 DNAJC24Q6P3W2 148 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 TDHQ8IZJ6 230 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 AHI1Q8N157 1196 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 ARHGEF39Q8N4T4 335 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 FIBCD1Q8N539 461 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 OR6P1Q8NGX9 317 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 KAT5Q92993 513 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 C11orf24Q96F05 449 aaPredicted RBP4.96□□□□□ -1.61
SCAF11-212ENST00000549162 SNRNP25Q9BV90 132 aaKnown RBP4.96□□□□□ -1.61
SCAF11-212ENST00000549162 OSBPL8Q9BZF1 889 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 GPR62Q9BZJ7 368 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 PREBQ9HCU5 417 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 DTLQ9NZJ0 730 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 RASAL2Q9UJF2 1139 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 HS3ST4Q9Y661 456 aa4.96□□□□□ -1.61
SCAF11-212ENST00000549162 A0A1W2PQH9 124 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 FAM221AA4D161 298 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 E7EVH7 732 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 LRP3O75074 770 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 FGF1P05230 155 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 APOA4P06727 396 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 RALAP11233 206 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 MYL4P12829 197 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 DEKP35659 375 aaKnown RBP4.96□□□□□ -1.62
SCAF11-212ENST00000549162 ACOT2P49753 483 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 PLOD1Q02809 727 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-212ENST00000549162 GPR33Q49SQ1 333 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 LACTB2Q53H82 288 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-212ENST00000549162 CFAP58Q5T655 872 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 SUSD1Q6UWL2 747 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 TECPR1Q7Z6L1 1165 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 WDR5BQ86VZ2 330 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 UBXN10Q96LJ8 280 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 RSPH9Q9H1X1 276 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-212ENST00000549162 MTUS1Q9ULD2 1270 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 BLACEA4D250 179 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 PRSS47A8MTI9 375 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 TMEM114B3SHH9 223 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 GAPDHSO14556 408 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-212ENST00000549162 TNFRSF10CO14798 259 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 SPINT1O43278 529 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 CHMP2AO43633 222 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 RFPL1O75677 317 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 RNASEH2AO75792 299 aaKnown RBP4.96□□□□□ -1.62
SCAF11-212ENST00000549162 PRKCGP05129 697 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 ELNP15502 786 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 YWHAQP27348 245 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 CD68P34810 354 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-212ENST00000549162 LIMK1P53667 647 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 SLC8A3P57103 927 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 HERC3Q15034 1050 aa4.96□□□□□ -1.62
SCAF11-212ENST00000549162 TEX44Q53QW1 395 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms