RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CUL9Q8IWT3 2517 aa21.35■■□□□ 1.01
CACNB3-210ENST00000548874 TTC24A2A3L6 582 aaPredicted RBP21.34■■□□□ 1.01
CACNB3-210ENST00000548874 DLL1O00548 723 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 OPHN1O60890 802 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 GCATO75600 419 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 LEFTY1O75610 366 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 COILP38432 576 aaPredicted RBP21.34■■□□□ 1.01
CACNB3-210ENST00000548874 KCNJ1P48048 391 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 FNTAP49354 379 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 NUBP1P53384 320 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 ZBTB16Q05516 673 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 ITKQ08881 620 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 IHHQ14623 411 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 CST6Q15828 149 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 ARSIQ5FYB1 569 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 PID1Q7Z2X4 250 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 ZNF572Q7Z3I7 529 aaPredicted RBP21.34■■□□□ 1.01
CACNB3-210ENST00000548874 PIP4K2CQ8TBX8 421 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 CCDC110Q8TBZ0 833 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 GRIN3AQ8TCU5 1115 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 SIPA1Q96FS4 1042 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 LRFN3Q9BTN0 628 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 OSBPL1AQ9BXW6 950 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 SLC25A51Q9H1U9 297 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 SCUBE2Q9NQ36 999 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 TTLL3Q9Y4R7 772 aa21.34■■□□□ 1.01
CACNB3-210ENST00000548874 CACNA1IQ9P0X4 2223 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 C1QTNF3-AMACRE9PGA6 284 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 CCDC188H7C350 402 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 ADH1BP00325 375 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 IL1BP01584 269 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 MMP2P08253 660 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 NFKB1P19838 968 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 PSMD8P48556 350 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 TUBB2AQ13885 445 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 P3H1Q32P28 736 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 FAM46CQ5VWP2 391 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 ATL2Q8NHH9 583 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 PRCCQ92733 491 aaPredicted RBP21.33■■□□□ 1.01
CACNB3-210ENST00000548874 TADA1Q96BN2 335 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 IMP4Q96G21 291 aaKnown RBP21.33■■□□□ 1.01
CACNB3-210ENST00000548874 FCRL5Q96RD9 977 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 TUBB2BQ9BVA1 445 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 GBA3Q9H227 469 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 FBXO4Q9UKT5 387 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 SCML1Q9UN30 329 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 MRFAP1Q9Y605 127 aa21.33■■□□□ 1.01
CACNB3-210ENST00000548874 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.32■■□□□ 1
CACNB3-210ENST00000548874 TRAFD1O14545 582 aaPredicted RBP21.32■■□□□ 1
CACNB3-210ENST00000548874 PIGNO95427 931 aa21.32■■□□□ 1
CACNB3-210ENST00000548874 C5AR1P21730 350 aa21.32■■□□□ 1
CACNB3-210ENST00000548874 SLC8A1P32418 973 aa21.32■■□□□ 1
CACNB3-210ENST00000548874 METAP1P53582 386 aa21.32■■□□□ 1
CACNB3-210ENST00000548874 SKOR1P84550 965 aa21.32■■□□□ 1
CACNB3-210ENST00000548874 SLC14A2Q15849 920 aa21.32■■□□□ 1
CACNB3-210ENST00000548874 WHAMMP3Q1A5X7 153 aa21.32■■□□□ 1
CACNB3-210ENST00000548874 ITPRIPL1Q6GPH6 555 aa21.32■■□□□ 1
CACNB3-210ENST00000548874 CCDC137Q6PK04 289 aaKnown RBP21.32■■□□□ 1
CACNB3-210ENST00000548874 GDPD4Q6W3E5 623 aa21.32■■□□□ 1
CACNB3-210ENST00000548874 PRPF39Q86UA1 669 aaKnown RBP21.32■■□□□ 1
CACNB3-210ENST00000548874 CACUL1Q86Y37 369 aa21.32■■□□□ 1
CACNB3-210ENST00000548874 ZNF641Q96N77 438 aaPredicted RBP21.32■■□□□ 1
CACNB3-210ENST00000548874 DDX47Q9H0S4 455 aaKnown RBP21.32■■□□□ 1
CACNB3-210ENST00000548874 PABPC3Q9H361 631 aaKnown RBP21.32■■□□□ 1
CACNB3-210ENST00000548874 ATP13A3Q9H7F0 1226 aa21.32■■□□□ 1
CACNB3-210ENST00000548874 BCCIPQ9P287 314 aaKnown RBP eCLIP21.32■■□□□ 1
CACNB3-210ENST00000548874 CCDC163A0A0D9SF12 145 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 TSPAN11A1L157 253 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 MID1O15344 667 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 SOCS5O75159 536 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 DNTTP04053 509 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 UGT2B4P06133 528 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 CD86P42081 329 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 PXNP49023 591 aaPredicted RBP21.31■■□□□ 1
CACNB3-210ENST00000548874 LMNB2Q03252 620 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 BCL2L1Q07817 233 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 ZNF805Q5CZA5 627 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 TSSK4Q6SA08 328 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 KIAA1324Q6UXG2 1013 aaKnown RBP21.31■■□□□ 1
CACNB3-210ENST00000548874 CAMK1DQ8IU85 385 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.31■■□□□ 1
CACNB3-210ENST00000548874 GLIS1Q8NBF1 620 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 SPATA4Q8NEY3 305 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 SPOCK2Q92563 424 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 FAM131CQ96AQ9 280 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 ARRDC3Q96B67 414 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 ECHDC3Q96DC8 303 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 GORASP1Q9BQQ3 440 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 SUV39H2Q9H5I1 410 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 USP36Q9P275 1121 aaKnown RBP21.31■■□□□ 1
CACNB3-210ENST00000548874 DKK3Q9UBP4 350 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 RSPH14Q9UHP6 348 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 ZNF318Q5VUA4 2279 aa21.31■■□□□ 1
CACNB3-210ENST00000548874 KPNA3O00505 521 aaPredicted RBP21.3■■□□□ 1
CACNB3-210ENST00000548874 HTRA2O43464 458 aaPredicted RBP21.3■■□□□ 1
CACNB3-210ENST00000548874 IFNB1P01574 187 aa21.3■■□□□ 1
CACNB3-210ENST00000548874 IGLV3-19P01714 112 aa21.3■■□□□ 1
CACNB3-210ENST00000548874 SERPINF2P08697 491 aa21.3■■□□□ 1
CACNB3-210ENST00000548874 ITGB7P26010 798 aa21.3■■□□□ 1
CACNB3-210ENST00000548874 SERPINA4P29622 427 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms