RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 NCSTNQ92542 709 aa4.15□□□□□ -1.75
CCDC38-206ENST00000548771 BICD1Q96G01 975 aa4.15□□□□□ -1.75
CCDC38-206ENST00000548771 MASTLQ96GX5 879 aa4.15□□□□□ -1.75
CCDC38-206ENST00000548771 TXNDC15Q96J42 360 aa4.15□□□□□ -1.75
CCDC38-206ENST00000548771 SPRY4Q9C004 299 aa4.15□□□□□ -1.75
CCDC38-206ENST00000548771 TMEM51Q9NW97 253 aa4.15□□□□□ -1.75
CCDC38-206ENST00000548771 DONSONQ9NYP3 566 aa4.15□□□□□ -1.75
CCDC38-206ENST00000548771 CPED1A4D0V7 1026 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 BUB3O43684 328 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 STRNO43815 780 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 VNN2O95498 520 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 SERPINC1P01008 464 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 CTPS1P17812 591 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 MYF6P23409 242 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 TTKP33981 857 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 ME3Q16798 604 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 FBXO43Q4G163 708 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 DCAF6Q58WW2 860 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 RUNDC3AQ59EK9 446 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 NAPEPLDQ6IQ20 393 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 RETSATQ6NUM9 610 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 JMJD6Q6NYC1 403 aaPredicted RBP4.14□□□□□ -1.75
CCDC38-206ENST00000548771 NAGSQ8N159 534 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 RFWD2Q8NHY2 731 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 IL17FQ96PD4 163 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 NODALQ96S42 347 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 TAF1DQ9H5J8 278 aaPredicted RBP4.14□□□□□ -1.75
CCDC38-206ENST00000548771 GRHPRQ9UBQ7 328 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 ADAM18Q9Y3Q7 739 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 NFS1Q9Y697 457 aa4.14□□□□□ -1.75
CCDC38-206ENST00000548771 PRAC2D3DTV9 90 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 DHX16O60231 1041 aaKnown RBP4.13□□□□□ -1.75
CCDC38-206ENST00000548771 CBX6O95503 412 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 IGHV4-30-4P0DP06 118 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 RBM5P52756 815 aaKnown RBP eCLIP4.13□□□□□ -1.75
CCDC38-206ENST00000548771 BRWD1-AS2P59051 145 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 ARL16Q0P5N6 197 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 BLMHQ13867 455 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 DHX34Q14147 1143 aaKnown RBP4.13□□□□□ -1.75
CCDC38-206ENST00000548771 PLEKHO1Q53GL0 409 aaPredicted RBP4.13□□□□□ -1.75
CCDC38-206ENST00000548771 XKR9Q5GH70 373 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 SYCP2LQ5T4T6 812 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 RHBDF2Q6PJF5 856 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 LINS1Q8NG48 757 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 SPATA20Q8TB22 786 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 TBC1D22AQ8WUA7 517 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 TMEM170AQ8WVE7 144 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 SORCS1Q8WY21 1168 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 TRIB2Q92519 343 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 CTDSP1Q9GZU7 261 aa4.13□□□□□ -1.75
CCDC38-206ENST00000548771 SAA2-SAA4A0A096LPE2 208 aa4.12□□□□□ -1.75
CCDC38-206ENST00000548771 KRT38O76015 456 aa4.12□□□□□ -1.75
CCDC38-206ENST00000548771 AFPP02771 609 aaKnown RBP4.12□□□□□ -1.75
CCDC38-206ENST00000548771 HNF1BP35680 557 aa4.12□□□□□ -1.75
CCDC38-206ENST00000548771 RPL3P39023 403 aaKnown RBP4.12□□□□□ -1.75
CCDC38-206ENST00000548771 CXCR3P49682 368 aa4.12□□□□□ -1.75
CCDC38-206ENST00000548771 RBM39Q14498 530 aaKnown RBP4.12□□□□□ -1.75
CCDC38-206ENST00000548771 CBWD5Q5RIA9 395 aa4.12□□□□□ -1.75
CCDC38-206ENST00000548771 TYW3Q6IPR3 259 aaKnown RBP4.12□□□□□ -1.75
CCDC38-206ENST00000548771 PLCB1Q9NQ66 1216 aa4.12□□□□□ -1.75
CCDC38-206ENST00000548771 ANKRD10Q9NXR5 420 aa4.12□□□□□ -1.75
CCDC38-206ENST00000548771 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.11□□□□□ -1.75
CCDC38-206ENST00000548771 HMX3A6NHT5 357 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 WNT9BO14905 357 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 GAGE7O76087 117 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 CH25HO95992 272 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 ADAP00813 363 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 IL1AP01583 271 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 GAGE12FP0CL80 117 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 GAGE12GP0CL81 117 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 GAGE12IP0CL82 117 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 GAGE1Q13065 139 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 GAGE4Q13068 117 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 HDAC1Q13547 482 aaPredicted RBP4.11□□□□□ -1.75
CCDC38-206ENST00000548771 CUL4BQ13620 913 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 CAPSQ13938 189 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 MRGPRG-AS1Q2M3A8 158 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 TUBB8Q3ZCM7 444 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 FAM83BQ5T0W9 1011 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 DSTYKQ6XUX3 929 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 C9orf139Q6ZV77 190 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 NEK10Q6ZWH5 1172 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 EXOC3L1Q86VI1 746 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 MON1AQ86VX9 555 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 FOXP4Q8IVH2 680 aaPredicted RBP4.11□□□□□ -1.75
CCDC38-206ENST00000548771 DENND6AQ8IWF6 608 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 MB21D2Q8IYB1 491 aaPredicted RBP4.11□□□□□ -1.75
CCDC38-206ENST00000548771 RASSF8Q8NHQ8 419 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 THAP4Q8WY91 577 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 RNF183Q96D59 192 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 RNFT2Q96EX2 444 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 LRFN5Q96NI6 719 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 ZNF385AQ96PM9 386 aaKnown RBP4.11□□□□□ -1.75
CCDC38-206ENST00000548771 UBTD1Q9HAC8 227 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 EBF2Q9HAK2 575 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 TCF7L2Q9NQB0 619 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 OR6C3Q9NZP0 311 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 ADGRF5Q8IZF2 1346 aa4.11□□□□□ -1.75
CCDC38-206ENST00000548771 PRR23AA6NEV1 266 aa4.1□□□□□ -1.75
CCDC38-206ENST00000548771 SOCS5O75159 536 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms