RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 HPCAL4Q9UM19 191 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 U3KQA8 63 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 LRP4O75096 1905 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 ANKRD36A6QL64 1941 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 SPTY2D1-AS1A0A0U1RR47 76 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 ZSCAN5CA6NGD5 496 aaPredicted RBP17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 IGLON5A6NGN9 336 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 LRRC10BA6NIK2 292 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 AREL1O15033 823 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 TLX3O43711 291 aaPredicted RBP17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 CKMT1AP12532 417 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 EPHB2P29323 1055 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 RABIFP47224 123 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 RPL7AP62424 266 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 MYLK3Q32MK0 819 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 LRRC73Q5JTD7 316 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 DENND6BQ8NEG7 585 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 ZNF548Q8NEK5 533 aaPredicted RBP17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 ASB12Q8WXK4 309 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 HMCESQ96FZ2 354 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 CRELD1Q96HD1 420 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 GDAP1L1Q96MZ0 367 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 KLHL32Q96NJ5 620 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 LENG8Q96PV6 779 aaPredicted RBP17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 SYT11Q9BT88 431 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 CLCA2Q9UQC9 943 aa17.65■□□□□ 0.42
CHMP1A-205ENST00000548650 BUB1O43683 1085 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 NEBLO76041 1014 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 POP4O95707 220 aaKnown RBP17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 CSF2P04141 144 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 ALPPL2P10696 532 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 ATP1A3P13637 1013 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 PFN3P60673 137 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 HNRNPKP61978 463 aaKnown RBP eCLIP17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 OGDHQ02218 1023 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 COL9A2Q14055 689 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 PDE1CQ14123 709 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 HS1BP3Q53T59 392 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 SCYL2Q6P3W7 929 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 TMC6Q7Z403 805 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 CASKIN2Q8WXE0 1202 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 ARHGEF26Q96DR7 871 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 APOLD1Q96LR9 279 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 DCBLD2Q96PD2 775 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 CNPY3Q9BT09 278 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 KLF15Q9UIH9 416 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 FZD10Q9ULW2 581 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 SMG1Q96Q15 3661 aaKnown RBP17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 ASXL3Q9C0F0 2248 aa17.64■□□□□ 0.41
CHMP1A-205ENST00000548650 ANKRD62A6NC57 917 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 WASH4PA8MWX3 477 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 K7ESM1 405 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 NEMP1O14524 444 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 FPGTO14772 594 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 SCAMP1O15126 338 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 CREB3O43889 395 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 IGSF6O95976 241 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 MYF5P13349 255 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 IGFALSP35858 605 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 AIF1P55008 147 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 RHOAP61586 193 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 E2F1Q01094 437 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 SEMG2Q02383 582 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 SGCGQ13326 291 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 SERINC3Q13530 473 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 PARP15Q460N3 678 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 SOWAHCQ53LP3 525 aaPredicted RBP17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 GDPD4Q6W3E5 623 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 ZNF354CQ86Y25 554 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 MCOLN2Q8IZK6 566 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 AOPEPQ8N6M6 819 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 FAM181AQ8N9Y4 354 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 NETO2Q8NC67 525 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 EPAS1Q99814 870 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 TTYH3Q9C0H2 523 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 LHX3Q9UBR4 397 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 AK5Q9Y6K8 562 aa17.63■□□□□ 0.41
CHMP1A-205ENST00000548650 NEMP2A6NFY4 417 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 RASA4BC9J798 803 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 H3BM21 787 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 FGF10O15520 208 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 RASA4O43374 803 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 BRINP1O60477 761 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 MT-CO3P00414 261 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 FERP16591 822 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 EIF2S3P41091 472 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 ABCG1P45844 678 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 YBEYP58557 167 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 INO80DQ53TQ3 878 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 CDCP2Q5VXM1 449 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 ACAD10Q6JQN1 1059 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 UMODL1-AS1Q8N2C9 162 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 SNIP1Q8TAD8 396 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 CENPTQ96BT3 561 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 DUSP23Q9BVJ7 150 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 PDFQ9HBH1 243 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 USP29Q9HBJ7 922 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 TAS2R14Q9NYV8 317 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 MFHAS1Q9Y4C4 1052 aa17.62■□□□□ 0.41
CHMP1A-205ENST00000548650 PCDHB1Q9Y5F3 818 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms