RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 GOLGA8MH3BSY2 632 aa29.12■■■□□ 2.25
BRF1-213ENST00000548421 PMPCBO75439 489 aa29.12■■■□□ 2.25
BRF1-213ENST00000548421 DRD1P21728 446 aa29.12■■■□□ 2.25
BRF1-213ENST00000548421 SARNPP82979 210 aaKnown RBP29.12■■■□□ 2.25
BRF1-213ENST00000548421 GRSF1Q12849 480 aaKnown RBP eCLIP29.12■■■□□ 2.25
BRF1-213ENST00000548421 NCEH1Q6PIU2 408 aa29.12■■■□□ 2.25
BRF1-213ENST00000548421 KDELC1Q6UW63 502 aa29.12■■■□□ 2.25
BRF1-213ENST00000548421 Q6ZVU0 165 aa29.12■■■□□ 2.25
BRF1-213ENST00000548421 PLPP6Q8IY26 295 aa29.12■■■□□ 2.25
BRF1-213ENST00000548421 ZCCHC9Q8N567 271 aaKnown RBP29.12■■■□□ 2.25
BRF1-213ENST00000548421 IPMKQ8NFU5 416 aa29.12■■■□□ 2.25
BRF1-213ENST00000548421 FRMD8Q9BZ67 464 aaPredicted RBP29.12■■■□□ 2.25
BRF1-213ENST00000548421 K7EQS6 105 aa29.11■■■□□ 2.25
BRF1-213ENST00000548421 IHHQ14623 411 aa29.11■■■□□ 2.25
BRF1-213ENST00000548421 CARD16Q5EG05 197 aa29.11■■■□□ 2.25
BRF1-213ENST00000548421 NAPEPLDQ6IQ20 393 aa29.11■■■□□ 2.25
BRF1-213ENST00000548421 TPRG1Q6ZUI0 275 aa29.11■■■□□ 2.25
BRF1-213ENST00000548421 MRGPRX2Q96LB1 330 aa29.11■■■□□ 2.25
BRF1-213ENST00000548421 FSD1LQ9BXM9 530 aa29.11■■■□□ 2.25
BRF1-213ENST00000548421 FOXP3Q9BZS1 431 aa29.11■■■□□ 2.25
BRF1-213ENST00000548421 NPC1O15118 1278 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 BMP1P13497 986 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 RECQLP46063 649 aaPredicted RBP29.1■■■□□ 2.25
BRF1-213ENST00000548421 WNT3AP56704 352 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 SPARCL1Q14515 664 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 PCSK7Q16549 785 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 EGFLAMQ63HQ2 1017 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 FSTL4Q6MZW2 842 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 SERPINA13PQ6UXR4 307 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 LINC00523Q86TU6 105 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 RYBPQ8N488 228 aaPredicted RBP29.1■■■□□ 2.25
BRF1-213ENST00000548421 EZH1Q92800 747 aaPredicted RBP29.1■■■□□ 2.25
BRF1-213ENST00000548421 ASB2Q96Q27 587 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 EVLQ9UI08 416 aaPredicted RBP29.1■■■□□ 2.25
BRF1-213ENST00000548421 HCN2Q9UL51 889 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 BNIP3LO60238 219 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 HNRNPLP14866 589 aaKnown RBP eCLIP29.1■■■□□ 2.253e-6■□□□□ 8.7
BRF1-213ENST00000548421 BRD3Q15059 726 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 MLF2Q15773 248 aaPredicted RBP29.1■■■□□ 2.25
BRF1-213ENST00000548421 OR6K2Q8NGY2 324 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 NSMCE3Q96MG7 304 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 SERPINB12Q96P63 405 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 TBL1YQ9BQ87 522 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 TMEM245Q9H330 911 aa29.1■■■□□ 2.25
BRF1-213ENST00000548421 XAB2Q9HCS7 855 aaKnown RBP29.1■■■□□ 2.25
BRF1-213ENST00000548421 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP29.09■■■□□ 2.25
BRF1-213ENST00000548421 EGFP01133 1207 aa29.09■■■□□ 2.25
BRF1-213ENST00000548421 ADRA1AP35348 466 aa29.09■■■□□ 2.25
BRF1-213ENST00000548421 CCNHP51946 323 aaPredicted RBP29.09■■■□□ 2.25
BRF1-213ENST00000548421 HIF1AQ16665 826 aa29.09■■■□□ 2.25
BRF1-213ENST00000548421 MYLK3Q32MK0 819 aa29.09■■■□□ 2.25
BRF1-213ENST00000548421 HNRNPA1L2Q32P51 320 aaKnown RBP29.09■■■□□ 2.25
BRF1-213ENST00000548421 DPY19L3Q6ZPD9 716 aa29.09■■■□□ 2.25
BRF1-213ENST00000548421 ZNF534Q76KX8 674 aa29.09■■■□□ 2.25
BRF1-213ENST00000548421 ZNF513Q8N8E2 541 aaPredicted RBP29.09■■■□□ 2.25
BRF1-213ENST00000548421 OR2A12Q8NGT7 310 aa29.09■■■□□ 2.25
BRF1-213ENST00000548421 FAM3CQ92520 227 aa29.09■■■□□ 2.25
BRF1-213ENST00000548421 FICDQ9BVA6 458 aa29.09■■■□□ 2.25
BRF1-213ENST00000548421 TSPYL1Q9H0U9 437 aa29.09■■■□□ 2.25
BRF1-213ENST00000548421 EDDM13A0A1B0GTR0 161 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 CCDC151A5D8V7 595 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 SHISA7A6NL88 538 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 MAN2B1O00754 1011 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 USP12O75317 370 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 PPFIA2O75334 1257 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 MLNP12872 115 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 CA4P22748 312 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 GRIA1P42261 906 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 IL12RB1P42701 662 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 KIR2DL1P43626 348 aaPredicted RBP29.08■■■□□ 2.25
BRF1-213ENST00000548421 TNNT3P45378 269 aaPredicted RBP29.08■■■□□ 2.25
BRF1-213ENST00000548421 ARL4CP56559 192 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 RAD51Q06609 339 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 OLIG2Q13516 323 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 MAP9Q49MG5 647 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 EMC10Q5UCC4 262 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 LRRC8BQ6P9F7 803 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 PDIK1LQ8N165 341 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 KCNV2Q8TDN2 545 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 PTPRN2Q92932 1015 aa29.08■■■□□ 2.25
BRF1-213ENST00000548421 TDRD1Q9BXT4 1180 aaKnown RBP29.08■■■□□ 2.25
BRF1-213ENST00000548421 WASH3PC4AMC7 463 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 ERLIN1O75477 346 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 POP4O95707 220 aaKnown RBP29.07■■■□□ 2.24
BRF1-213ENST00000548421 SEC13P55735 322 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 PRKCQQ04759 706 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 GRM3Q14832 879 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 CEP128Q6ZU80 1094 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 CAND1Q86VP6 1230 aaKnown RBP29.07■■■□□ 2.24
BRF1-213ENST00000548421 ZNF366Q8N895 744 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 AENQ8WTP8 325 aaKnown RBP29.07■■■□□ 2.24
BRF1-213ENST00000548421 IFT43Q96FT9 208 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 FEM1CQ96JP0 617 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 PWWP2AQ96N64 755 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 TUBGCP5Q96RT8 1024 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 APOL2Q9BQE5 337 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 PHACTR1Q9C0D0 580 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 ATP13A3Q9H7F0 1226 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 RAI2Q9Y5P3 530 aa29.07■■■□□ 2.24
BRF1-213ENST00000548421 ANTXRLA6NF34 631 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms