RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 UCKL1Q9NWZ5 548 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 IPO11Q9UI26 975 aaKnown RBP6.82□□□□□ -1.32
SCAF11-211ENST00000547950 RAXQ9Y2V3 346 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 DAAM1Q9Y4D1 1078 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 FADS3Q9Y5Q0 445 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 AKAP13Q12802 2813 aa6.82□□□□□ -1.32
SCAF11-211ENST00000547950 ASCC3Q8N3C0 2202 aaKnown RBP6.82□□□□□ -1.32
SCAF11-211ENST00000547950 TNRC6BQ9UPQ9 1833 aaKnown RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 POM121BA6NF01 834 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 IGLON5A6NGN9 336 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 C16orf96A6NNT2 1141 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 RAD51BO15315 384 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 FFAR2O15552 330 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 CCP110O43303 1012 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 SIGLEC6O43699 453 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 RFPL3O75679 317 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 POP4O95707 220 aaKnown RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 MBD3O95983 291 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 UGT2B4P06133 528 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 C1SP09871 688 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 MYF5P13349 255 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 FERP16591 822 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 ITIH2P19823 946 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 DGKAP23743 735 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 ITGB7P26010 798 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 ACADVLP49748 655 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF143P52747 638 aaPredicted RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 GEMIN4P57678 1058 aaKnown RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 SNRPD1P62314 119 aaKnown RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 RPS21P63220 83 aaKnown RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 DAB2P98082 770 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 TARDBPQ13148 414 aaKnown RBP eCLIP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 FGL2Q14314 439 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 ANO6Q4KMQ2 910 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 TMEM259Q4ZIN3 620 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 HS1BP3Q53T59 392 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF805Q5CZA5 627 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 ATXN7L2Q5T6C5 722 aaPredicted RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 MANEALQ5VSG8 457 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 MON1BQ7L1V2 547 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 PARS2Q7L3T8 475 aaKnown RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 APTXQ7Z2E3 356 aaKnown RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 KANSL1Q7Z3B3 1105 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 TMC6Q7Z403 805 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 IRF2BP2Q7Z5L9 587 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 PTAR1Q7Z6K3 402 aaPredicted RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 TMPRSS12Q86WS5 348 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 DNAAF5Q86Y56 855 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 MCOLN2Q8IZK6 566 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF511Q8NB15 262 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 TMEM145Q8NBT3 493 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 C3orf20Q8ND61 904 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 OR2AP1Q8NGE2 309 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 TSC1Q92574 1164 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 ISG20Q96AZ6 181 aaKnown RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 BMFQ96LC9 184 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 KLHL32Q96NJ5 620 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 CNPY3Q9BT09 278 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 NAT10Q9H0A0 1025 aaKnown RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 KLC2Q9H0B6 622 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 HSD3B7Q9H2F3 369 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 RETREG1Q9H6L5 497 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 NOL6Q9H6R4 1146 aaKnown RBP6.81□□□□□ -1.32
SCAF11-211ENST00000547950 GPATCH2LQ9NWQ4 482 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 DNAJC28Q9NX36 388 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 TAS2R14Q9NYV8 317 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 ITM2BQ9Y287 266 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 PCDHGA1Q9Y5H4 931 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 HS3ST3A1Q9Y663 406 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 AK5Q9Y6K8 562 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 PLXND1Q9Y4D7 1925 aa6.81□□□□□ -1.32
SCAF11-211ENST00000547950 MUC22E2RYF6 1773 aaPredicted RBP6.8□□□□□ -1.32
SCAF11-211ENST00000547950 ADAMTS9Q9P2N4 1935 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 TCRBV5S1A1TA0A578 114 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 A6NNZ2 444 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 SMTNL1A8MU46 457 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 RASA4BC9J798 803 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 FPGTO14772 594 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 RASA4O43374 803 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 TSPAN6O43657 245 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 MMP20O60882 483 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 TMCC1O94876 653 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 GSRP00390 522 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 IGF2RP11717 2491 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 CDK4P11802 303 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 DESP17661 470 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 VARSP26640 1264 aaKnown RBP6.8□□□□□ -1.32
SCAF11-211ENST00000547950 HNF1BP35680 557 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 ABL2P42684 1182 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 GSCP56915 257 aaPredicted RBP6.8□□□□□ -1.32
SCAF11-211ENST00000547950 YBEYP58557 167 aaPredicted RBP6.8□□□□□ -1.32
SCAF11-211ENST00000547950 RHOAP61586 193 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 OGDHQ02218 1023 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 SEMG2Q02383 582 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 RAD51Q06609 339 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF211Q13398 564 aaPredicted RBP6.8□□□□□ -1.32
SCAF11-211ENST00000547950 MAMLD1Q13495 774 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 FZD2Q14332 565 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 CYTH1Q15438 398 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 FILIP1LQ4L180 1135 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms