RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 INO80DQ53TQ3 878 aaPredicted RBP13.54□□□□□ -0.24
CPSF6-204ENST00000547486 LRRC73Q5JTD7 316 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 GDPD4Q6W3E5 623 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 KYAT3Q6YP21 454 aaKnown RBP13.54□□□□□ -0.24
CPSF6-204ENST00000547486 PTAR1Q7Z6K3 402 aaPredicted RBP13.54□□□□□ -0.24
CPSF6-204ENST00000547486 TTC7BQ86TV6 843 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 ARFGAP1Q8N6T3 406 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 OR4C6Q8NH72 309 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 TTYH3Q9C0H2 523 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 GPATCH2LQ9NWQ4 482 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 DNAJC28Q9NX36 388 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 ARID1BQ8NFD5 2236 aaPredicted RBP13.54□□□□□ -0.24
CPSF6-204ENST00000547486 TP53BP1Q12888 1972 aaPredicted RBP13.53□□□□□ -0.24
CPSF6-204ENST00000547486 ZSCAN5CA6NGD5 496 aaPredicted RBP13.53□□□□□ -0.24
CPSF6-204ENST00000547486 NEMP1O14524 444 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 ATMINO43313 823 aaPredicted RBP13.53□□□□□ -0.24
CPSF6-204ENST00000547486 NEBLO76041 1014 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 MBD3O95983 291 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 TIMP2P16035 220 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 YBEYP58557 167 aaPredicted RBP13.53□□□□□ -0.24
CPSF6-204ENST00000547486 CA9Q16790 459 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 E4F1Q66K89 784 aaPredicted RBP13.53□□□□□ -0.24
CPSF6-204ENST00000547486 DCUN1D2Q6PH85 259 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 TMC6Q7Z403 805 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 ZNF354CQ86Y25 554 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 DCP2Q8IU60 420 aaKnown RBP13.53□□□□□ -0.24
CPSF6-204ENST00000547486 UMODL1-AS1Q8N2C9 162 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 FAM174AQ8TBP5 190 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 ASB12Q8WXK4 309 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 RFFLQ8WZ73 363 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 RAB7BQ96AH8 199 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 CENPTQ96BT3 561 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 IFT43Q96FT9 208 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 OSBPL1AQ9BXW6 950 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 TRIM7Q9C029 511 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 PNMA8BQ9ULN7 279 aaPredicted RBP13.53□□□□□ -0.24
CPSF6-204ENST00000547486 MFHAS1Q9Y4C4 1052 aa13.53□□□□□ -0.24
CPSF6-204ENST00000547486 GOLGA4Q13439 2230 aaKnown RBP13.53□□□□□ -0.24
CPSF6-204ENST00000547486 LY6G6EA0A0G2JKS1 128 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 ANKRD62A6NC57 917 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 LRRC53A6NM62 1247 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 J3KR12 359 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 K7ESM1 405 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 FPGTO14772 594 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 SCAMP1O15126 338 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 MMP20O60882 483 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 CSF2P04141 144 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 CCDC172P0C7W6 258 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 CKMT1AP12532 417 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 HNF1BP35680 557 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 RABIFP47224 123 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 AIF1P55008 147 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 PFN3P60673 137 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 RHOAP61586 193 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 EIF2B5Q13144 721 aaKnown RBP13.52□□□□□ -0.25
CPSF6-204ENST00000547486 PDE1CQ14123 709 aaPredicted RBP13.52□□□□□ -0.25
CPSF6-204ENST00000547486 PLEKHA7Q6IQ23 1121 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 ZNF571Q7Z3V5 609 aaPredicted RBP13.52□□□□□ -0.25
CPSF6-204ENST00000547486 CASKIN2Q8WXE0 1202 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 CELF6Q96J87 481 aaKnown RBP13.52□□□□□ -0.25
CPSF6-204ENST00000547486 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 EXOC2Q96KP1 924 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 APOLD1Q96LR9 279 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 GDAP1L1Q96MZ0 367 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 NAP1L5Q96NT1 182 aaPredicted RBP13.52□□□□□ -0.25
CPSF6-204ENST00000547486 PEBP4Q96S96 227 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 EPAS1Q99814 870 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 BPIFA3Q9BQP9 254 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 HAUS4Q9H6D7 363 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 LRRC19Q9H756 370 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 CATSPERBQ9H7T0 1116 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 PDFQ9HBH1 243 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 MBNL1Q9NR56 388 aaKnown RBP13.52□□□□□ -0.25
CPSF6-204ENST00000547486 LHX3Q9UBR4 397 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 MYO6Q9UM54 1294 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 U3KQA8 63 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 ZFYVE26Q68DK2 2539 aa13.52□□□□□ -0.25
CPSF6-204ENST00000547486 ANKRD11Q6UB99 2663 aaPredicted RBP13.51□□□□□ -0.25
CPSF6-204ENST00000547486 A0A087WV48 116 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 TMEM191CA6NGB0 347 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 BUB1BO60566 1050 aaPredicted RBP13.51□□□□□ -0.25
CPSF6-204ENST00000547486 PIGNO95427 931 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 FTLP02792 175 aaPredicted RBP13.51□□□□□ -0.25
CPSF6-204ENST00000547486 NME1P15531 152 aaKnown RBP13.51□□□□□ -0.25
CPSF6-204ENST00000547486 DAB2P98082 770 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 RTP5Q14D33 572 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 PARP15Q460N3 678 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 PDZD3Q86UT5 571 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 DCBLD1Q8N8Z6 715 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 FAM181AQ8N9Y4 354 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 ZNF548Q8NEK5 533 aaPredicted RBP13.51□□□□□ -0.25
CPSF6-204ENST00000547486 CRELD1Q96HD1 420 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 SLC39A8Q9C0K1 460 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 NRSN2Q9GZP1 204 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 NAT10Q9H0A0 1025 aaKnown RBP13.51□□□□□ -0.25
CPSF6-204ENST00000547486 TCEAL2Q9H3H9 227 aaPredicted RBP13.51□□□□□ -0.25
CPSF6-204ENST00000547486 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 PARVAQ9NVD7 372 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 NLGN3Q9NZ94 848 aa13.51□□□□□ -0.25
CPSF6-204ENST00000547486 AIPL1Q9NZN9 384 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms