RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 FBXO43Q4G163 708 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 EFHC1Q5JVL4 640 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 MYLK4Q86YV6 388 aaPredicted RBP4.33□□□□□ -1.72
CCDC38-204ENST00000546816 LINS1Q8NG48 757 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 LILRB1Q8NHL6 650 aaPredicted RBP4.33□□□□□ -1.72
CCDC38-204ENST00000546816 NCSTNQ92542 709 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 TAF15Q92804 592 aaKnown RBP eCLIP4.33□□□□□ -1.72
CCDC38-204ENST00000546816 GOLGA1Q92805 767 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 CTDSP1Q9GZU7 261 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 CLDN16Q9Y5I7 305 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 MORC2Q9Y6X9 1032 aaPredicted RBP4.33□□□□□ -1.72
CCDC38-204ENST00000546816 WDR81Q562E7 1941 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 A0A0U1RQJ8 604 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 DYTNA2CJ06 578 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 J3KR12 359 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 MCM2P49736 904 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 SLC18A2Q05940 514 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 ME3Q16798 604 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 FAM83BQ5T0W9 1011 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 NCAPH2Q6IBW4 605 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 NAPEPLDQ6IQ20 393 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 RETSATQ6NUM9 610 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 GJB7Q6PEY0 223 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 DSTYKQ6XUX3 929 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 SPICE1Q8N0Z3 855 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 GALNT15Q8N3T1 639 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 ZNF114Q8NC26 417 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 MCPH1Q8NEM0 835 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 SDCCAG3Q96C92 435 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 MASTLQ96GX5 879 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 TXNDC15Q96J42 360 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 CHODLQ9H9P2 273 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 DONSONQ9NYP3 566 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 CD207Q9UJ71 328 aa4.32□□□□□ -1.72
CCDC38-204ENST00000546816 SERINC4A6NH21 518 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 TIMM23O14925 209 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 IL1AP01583 271 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 DAOP14920 347 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 CYP4A11Q02928 519 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 FAM27E3Q08E93 113 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 UBE4AQ14139 1066 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 LPIN1Q14693 890 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 CEP85LQ5SZL2 805 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 ZNF771Q7L3S4 317 aaPredicted RBP4.31□□□□□ -1.72
CCDC38-204ENST00000546816 RASSF8Q8NHQ8 419 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 TBC1D22AQ8WUA7 517 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 TMEM51Q9NW97 253 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 TAGLN3Q9UI15 199 aa4.31□□□□□ -1.72
CCDC38-204ENST00000546816 IGLV5-37A0A075B6J1 123 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 SERPINC1P01008 464 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 CTPS1P17812 591 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 CD72P21854 359 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 HNF1BP35680 557 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 CHAF1AQ13111 956 aaPredicted RBP4.3□□□□□ -1.72
CCDC38-204ENST00000546816 MYBPHQ13203 477 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 HDAC1Q13547 482 aaPredicted RBP4.3□□□□□ -1.72
CCDC38-204ENST00000546816 CAPSQ13938 189 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 TRIM14Q14142 442 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 CBWD5Q5RIA9 395 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 TYW3Q6IPR3 259 aaKnown RBP4.3□□□□□ -1.72
CCDC38-204ENST00000546816 CCDC174Q6PII3 467 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 PGBD5Q8N414 524 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 VPS37AQ8NEZ2 397 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 THAP4Q8WY91 577 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 RNFT2Q96EX2 444 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 ADGRG7Q96K78 797 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 SAYSD1Q9NPB0 183 aa4.3□□□□□ -1.72
CCDC38-204ENST00000546816 NPIPB11E5RHQ5 1161 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 DHX16O60231 1041 aaKnown RBP4.29□□□□□ -1.72
CCDC38-204ENST00000546816 ADAP00813 363 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 FMO4P31512 558 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 TTKP33981 857 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 ADD2P35612 726 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 GLIPR1P48060 266 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 CENPAP49450 140 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 CXCR3P49682 368 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 ARSFP54793 590 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 ST3GAL1Q11201 340 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 MORC3Q14149 939 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 SETMARQ53H47 684 aaPredicted RBP4.29□□□□□ -1.72
CCDC38-204ENST00000546816 AADATQ8N5Z0 425 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 ZMIZ2Q8NF64 920 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 RUBCNQ92622 972 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 RBM17Q96I25 401 aaKnown RBP4.29□□□□□ -1.72
CCDC38-204ENST00000546816 NPLQ9BXD5 320 aaPredicted RBP4.29□□□□□ -1.72
CCDC38-204ENST00000546816 MMP24Q9Y5R2 645 aa4.29□□□□□ -1.72
CCDC38-204ENST00000546816 B9A039 149 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 STX16-NPEPL1H3BU86 382 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 STX16O14662 325 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 SLC25A17O43808 307 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 HBP1O60381 514 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 VNN2O95498 520 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 PAK4O96013 591 aaPredicted RBP4.28□□□□□ -1.72
CCDC38-204ENST00000546816 AFPP02771 609 aaKnown RBP4.28□□□□□ -1.72
CCDC38-204ENST00000546816 TK1P04183 234 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 TNNT1P13805 278 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 MYF6P23409 242 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 AARSP49588 968 aaKnown RBP eCLIP4.28□□□□□ -1.72
CCDC38-204ENST00000546816 DLG1Q12959 904 aa4.28□□□□□ -1.72
CCDC38-204ENST00000546816 POSTNQ15063 836 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms