RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 NTRK1P04629 796 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 SLC7A1P30825 629 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 CHI3L1P36222 383 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-212ENST00000546744 RPL3P39023 403 aaKnown RBP12.91□□□□□ -0.34
PTCH1-212ENST00000546744 PTGIRP43119 386 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 MPP1Q00013 466 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 BAATQ14032 418 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-212ENST00000546744 RBM48Q5RL73 367 aaKnown RBP12.91□□□□□ -0.34
PTCH1-212ENST00000546744 RNF19BQ6ZMZ0 732 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 FAM43BQ6ZT52 329 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-212ENST00000546744 CHST13Q8NET6 341 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 NARS2Q96I59 477 aaKnown RBP12.91□□□□□ -0.34
PTCH1-212ENST00000546744 APOL5Q9BWW9 433 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 DCDC2CA8MYV0 355 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 YES1P07947 543 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 MAPK10P53779 464 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 IST1P53990 364 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 NADK2Q4G0N4 442 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 KLHDC10Q6PID8 442 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 ARHGAP36Q6ZRI8 547 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 ZNF410Q86VK4 478 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 LRRC20Q8TCA0 184 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 OSBPL10Q9BXB5 764 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 ZDHHC18Q9NUE0 388 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 TMEM59LQ9UK28 342 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 SAMD4AQ9UPU9 718 aaKnown RBP12.91□□□□□ -0.34
PTCH1-212ENST00000546744 RNASEH1O60930 286 aaKnown RBP12.91□□□□□ -0.34
PTCH1-212ENST00000546744 RAB10P61026 200 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 ATP6V0D1P61421 351 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 STX4Q12846 297 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 ZNF284Q2VY69 593 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 NOTUMQ6P988 496 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 C1orf186Q6ZWK4 172 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 BIRC8Q96P09 236 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 ADGRE3Q9BY15 652 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 KCNMB3Q9NPA1 279 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 SH3BP4Q9P0V3 963 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 SLC7A8Q9UHI5 535 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 SNX7Q9UNH6 387 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 ASTN1O14525 1302 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 C8BP07358 591 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 ZSCAN5DPP0CG00 497 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 PTX3P26022 381 aaPredicted RBP12.9□□□□□ -0.34
PTCH1-212ENST00000546744 HNF4AP41235 474 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 FSTL1Q12841 308 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 MAPKAPK3Q16644 382 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 NECAB2Q7Z6G3 386 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 CDK20Q8IZL9 346 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 FAXDC2Q96IV6 333 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 RHOJQ9H4E5 214 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 FAM124BQ9H5Z6 455 aaPredicted RBP12.9□□□□□ -0.34
PTCH1-212ENST00000546744 COMMD9Q9P000 198 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 RRN3P2A6NIE6 340 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 PTGS2P35354 604 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 GTF2BQ00403 316 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 SLC6A3Q01959 620 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 CNSTQ6PJW8 725 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 VSTM1Q6UX27 236 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 KDELC2Q7Z4H8 507 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 PM20D2Q8IYS1 436 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 BANPQ8N9N5 519 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 ZFP42Q96MM3 310 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 CINPQ9BW66 212 aaPredicted RBP12.9□□□□□ -0.34
PTCH1-212ENST00000546744 UNKQ9C0B0 810 aaKnown RBP12.9□□□□□ -0.34
PTCH1-212ENST00000546744 G3V2T6 193 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 MPZL2O60487 215 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 CCNFP41002 786 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 MARCKSL1P49006 195 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 SCNN1BP51168 640 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 AKR1D1P51857 326 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 NOMO3P69849 1222 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 LSAMPQ13449 338 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 ZCCHC8Q6NZY4 707 aaKnown RBP12.9□□□□□ -0.34
PTCH1-212ENST00000546744 ERICH5Q6P6B1 374 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 POTEHQ6S545 545 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 ASZ1Q8WWH4 475 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 CIB1Q99828 191 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 TAS2R14Q9NYV8 317 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 PSME2Q9UL46 239 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 PDE10AQ9Y233 779 aa12.9□□□□□ -0.34
PTCH1-212ENST00000546744 H0YJX3 145 aa12.9□□□□□ -0.35
PTCH1-212ENST00000546744 PRKD3O94806 890 aa12.9□□□□□ -0.35
PTCH1-212ENST00000546744 STXBP5Q5T5C0 1151 aa12.9□□□□□ -0.35
PTCH1-212ENST00000546744 IL31Q6EBC2 164 aa12.9□□□□□ -0.35
PTCH1-212ENST00000546744 OTOP1Q7RTM1 612 aa12.9□□□□□ -0.35
PTCH1-212ENST00000546744 SYT15Q9BQS2 421 aa12.9□□□□□ -0.35
PTCH1-212ENST00000546744 ARMC7Q9H6L4 198 aa12.9□□□□□ -0.35
PTCH1-212ENST00000546744 SNX15Q9NRS6 342 aa12.9□□□□□ -0.35
PTCH1-212ENST00000546744 TRMT13Q9NUP7 481 aaKnown RBP12.9□□□□□ -0.35
PTCH1-212ENST00000546744 RCOR3Q9P2K3 495 aaPredicted RBP12.9□□□□□ -0.35
PTCH1-212ENST00000546744 MFHAS1Q9Y4C4 1052 aa12.9□□□□□ -0.35
PTCH1-212ENST00000546744 WASF2Q9Y6W5 498 aa12.9□□□□□ -0.35
PTCH1-212ENST00000546744 ORC5O43913 435 aa12.89□□□□□ -0.35
PTCH1-212ENST00000546744 PPP3CCP48454 512 aa12.89□□□□□ -0.35
PTCH1-212ENST00000546744 PYDC2Q56P42 97 aa12.89□□□□□ -0.35
PTCH1-212ENST00000546744 C6orf52Q5T4I8 152 aa12.89□□□□□ -0.35
PTCH1-212ENST00000546744 FRMD7Q6ZUT3 714 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms