RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-225	ENST00000545920	B4GALNT2	Q8NHY0	566 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	FBXO27	Q8NI29	283 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	URGCP	Q8TCY9	931 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	RNF139	Q8WU17	664 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	STYX	Q8WUJ0	223 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	HDAC11	Q96DB2	347 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	ASB9	Q96DX5	294 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	P2RY11	Q96G91	374 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	MAEL	Q96JY0	434 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	CLPTM1L	Q96KA5	538 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	SPATA33	Q96N06	139 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	TSGA13	Q96PP4	275 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	SLC2A13	Q96QE2	648 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	CYP2S1	Q96SQ9	504 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	UHRF1	Q96T88	793 aa	Predicted RBP	6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	HNRNPAB	Q99729	332 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	KIFC1	Q9BW19	673 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	YTHDF1	Q9BYJ9	559 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	TRIM15	Q9C019	465 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	UBE2O	Q9C0C9	1292 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	GBA3	Q9H227	469 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	MROH8	Q9H579	483 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	UGT1A7	Q9HAW7	530 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	UGT1A10	Q9HAW8	530 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	UGT1A8	Q9HAW9	530 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	PIDD1	Q9HB75	910 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	EML4	Q9HC35	981 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	ZBTB26	Q9HCK0	441 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	VPS45	Q9NRW7	570 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	SETD4	Q9NVD3	440 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	TBCCD1	Q9NVR7	557 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	PNPO	Q9NVS9	261 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	TMEM45A	Q9NWC5	275 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	TMEM216	Q9P0N5	145 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	HMGXB4	Q9UGU5	601 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	RIMS3	Q9UJD0	308 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	VANGL2	Q9ULK5	521 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	UBQLN1	Q9UMX0	589 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	GJA3	Q9Y6H8	435 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920		A0A0G2JMZ2	1700 aa		6.56	□□□□□ -1.36
SNHG1-225	ENST00000545920	FAM155A	B1AL88	458 aa	Predicted RBP	6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	DCLK1	O15075	740 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	B4GALT5	O43286	388 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	CACNG3	O60359	315 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	PIAS1	O75925	651 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	TFAP2A	P05549	437 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	C2	P06681	752 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	SMIM18	P0DKX4	95 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	ZNF23	P17027	643 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	PSMC3	P17980	439 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	ARF4	P18085	180 aa	Predicted RBP	6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	PAM	P19021	973 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	TFEB	P19484	476 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	CYP2B6	P20813	491 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	WARS	P23381	471 aa	Known RBP	6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	PML	P29590	882 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	ACADVL	P49748	655 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	NUP107	P57740	925 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	CDH17	Q12864	832 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	SLC10A2	Q12908	348 aa	Predicted RBP	6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	DLG1	Q12959	904 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	ZBTB17	Q13105	803 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	SQLE	Q14534	574 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	CA9	Q16790	459 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	SV2C	Q496J9	727 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	COQ5	Q5HYK3	327 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	RALGPS1	Q5JS13	557 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	KCTD11	Q693B1	232 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	FSTL4	Q6MZW2	842 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	ZCCHC23	Q6ZST2	131 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	RFX8	Q6ZV50	586 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	FKBP9P1	Q75LS8	142 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	BEND5	Q7L4P6	421 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	STRA8	Q7Z7C7	330 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	KCNMB4	Q86W47	210 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	HPS6	Q86YV9	775 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	ERI1	Q8IV48	349 aa	Known RBP	6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	SLC22A9	Q8IVM8	553 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	ZNF567	Q8N184	647 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	NUP93	Q8N1F7	819 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	SCML4	Q8N228	414 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	MPP5	Q8N3R9	675 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	LRRC71	Q8N4P6	559 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	TAB3	Q8N5C8	712 aa	Predicted RBP	6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	LZTR1	Q8N653	840 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	TOP6BL	Q8N6T0	577 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	TNIP2	Q8NFZ5	429 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	PPTC7	Q8NI37	304 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	TSPEAR	Q8WU66	669 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	KBTBD7	Q8WVZ9	684 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	POP5	Q969H6	163 aa	Known RBP	6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	ROPN1L	Q96C74	230 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	PGBD4	Q96DM1	585 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	SNX27	Q96L92	541 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	ZNF597	Q96LX8	424 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	LENG8	Q96PV6	779 aa	Predicted RBP	6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	ASB2	Q96Q27	587 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	NPY6R	Q99463	290 aa		6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	MRPL57	Q9BQC6	102 aa	Known RBP	6.55	□□□□□ -1.36
SNHG1-225	ENST00000545920	GATA5	Q9BWX5	397 aa	Predicted RBP	6.55	□□□□□ -1.36

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