RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 A6NHS1 94 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 B4GALT4O60513 344 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 SLC35G4P0C7Q5 338 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 GZMAP12544 262 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 PPP2R1BP30154 601 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 NOS2P35228 1153 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 OTUD4Q01804 1114 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 KPNB1Q14974 876 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 PIGZQ86VD9 579 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.69□□□□□ -1.025e-7■■■■■ 48.1
CLIP1-218ENST00000545889 HSFY1Q96LI6 401 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 MCCC1Q96RQ3 725 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 SH3BP4Q9P0V3 963 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 MARCOQ9UEW3 520 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 ANGPTL2Q9UKU9 493 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 DOCK3Q8IZD9 2030 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 MICAL2O94851 1124 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 EIF2B2P49770 351 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 ZNF135P52742 658 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 SLC6A3Q01959 620 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 INAQ16352 499 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 MEA1Q16626 185 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 C1orf146Q5VVC0 180 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 FOXR2Q6PJQ5 311 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 IRF2BP2Q7Z5L9 587 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 TRIML2Q8N7C3 387 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 EMID1Q96A84 441 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 TGS1Q96RS0 853 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 KLF6Q99612 283 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 AGO3Q9H9G7 860 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 APOBEC3GQ9HC16 384 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 RPRD1BQ9NQG5 326 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 IARS2Q9NSE4 1012 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 PSMC3IPQ9P2W1 217 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 OR12D3Q9UGF7 316 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 PPIEQ9UNP9 301 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 ABHD14A-ACY1A0A1B0GW23 586 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 GUCY1B2O75343 617 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 AMPD1P23109 780 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 ARPC4P59998 168 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 CDH17Q12864 832 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 ILF3Q12906 894 aaKnown RBP eCLIP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 FBXO46Q6PJ61 603 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 MON1AQ86VX9 555 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 IQCKQ8N0W5 287 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 LNX1Q8TBB1 728 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 ANKRD27Q96NW4 1050 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 ECSITQ9BQ95 431 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 MRPL1Q9BYD6 325 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 CEP41Q9BYV8 373 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 FAM192AQ9GZU8 254 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 THEGQ9P2T0 379 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 DOCK1Q14185 1865 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 MCM3APO60318 1980 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 ANKDD1BA6NHY2 528 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 PSTPIP1O43586 416 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 CCNT2O60583 730 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 LCA5LO95447 670 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 IQCF3P0C7M6 154 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 CTGFP29279 349 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 EEF1DP29692 281 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 ZNF844Q08AG5 666 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 TAF10Q12962 218 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 TRIM60Q495X7 471 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 C14orf80Q86SX3 495 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 FAM71AQ8IYT1 594 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 TPCN2Q8NHX9 752 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 ELMO1Q92556 727 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 MRPL45Q9BRJ2 306 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 OSBPL6Q9BZF3 934 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 DUS2Q9NX74 493 aaKnown RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 EURLQ9NYK6 297 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 KIAA1522Q9P206 1035 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-218ENST00000545889 PTPRJQ12913 1337 aa8.69□□□□□ -1.02
CLIP1-218ENST00000545889 E5RJQ4 531 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 PPEF2O14830 753 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ELFN1P0C7U0 828 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ENO3P13929 434 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 MAGEA4P43358 317 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 CD151P48509 253 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 VSTM1Q6UX27 236 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 DSELQ8IZU8 1212 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 C4orf33Q8N1A6 199 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 BEND7Q8N7W2 519 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 COLGALT1Q8NBJ5 622 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 PXYLP1Q8TE99 480 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 RERGQ96A58 199 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 COL26A1Q96A83 441 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 REXO5Q96IC2 774 aaKnown RBP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ACOX2Q99424 681 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 TRIM51Q9BSJ1 452 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 C17orf80Q9BSJ5 609 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 OSBPL10Q9BXB5 764 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 GPR88Q9GZN0 384 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 DPEP2Q9H4A9 486 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 PDLIM7Q9NR12 457 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 TAS2R13Q9NYV9 303 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ACOT9Q9Y305 439 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 PCDHB11Q9Y5F2 797 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 CLDN5O00501 218 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms