RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 GALNT2Q10471 571 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 SLC12A1Q13621 1099 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 SCN4BQ8IWT1 228 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 KDM1BQ8NB78 822 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 NAT14Q8WUY8 206 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 CENPKQ9BS16 269 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 MAF1Q9H063 256 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 LIN28AQ9H9Z2 209 aaKnown RBP15.2■□□□□ 0.02
USP28-214ENST00000545540 TSR3Q9UJK0 312 aaKnown RBP15.2■□□□□ 0.02
USP28-214ENST00000545540 TCAF2A6NFQ2 919 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 HMBSP08397 361 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 CCDC166P0CW27 439 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 UGT1A6P19224 532 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 RAB10P61026 200 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 PTK2BQ14289 1009 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 PRPSAP1Q14558 356 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 PIGGQ5H8A4 983 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 NAPEPLDQ6IQ20 393 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 PKN3Q6P5Z2 889 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 BHLHA9Q7RTU4 235 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 CIR1Q86X95 450 aaPredicted RBP15.2■□□□□ 0.02
USP28-214ENST00000545540 METTL25Q8N6Q8 603 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 OR52K2Q8NGK3 314 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 LRTOMTQ8WZ04 291 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 SIKE1Q9BRV8 207 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 STN1Q9H668 368 aaKnown RBP15.2■□□□□ 0.02
USP28-214ENST00000545540 PSMD13Q9UNM6 376 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 ST3GAL5Q9UNP4 418 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 BRCA1P38398 1863 aaKnown RBP15.2■□□□□ 0.02
USP28-214ENST00000545540 RRN3P2A6NIE6 340 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 PAGE1O75459 146 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 PRSS56P0CW18 603 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 SLC5A9Q2M3M2 681 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 ITPRIPL1Q6GPH6 555 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 DENND5AQ6IQ26 1287 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 STYXQ8WUJ0 223 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 HDAC11Q96DB2 347 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 MPP4Q96JB8 637 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 FCRL2Q96LA5 508 aaPredicted RBP15.2■□□□□ 0.02
USP28-214ENST00000545540 ZNF512Q96ME7 567 aaPredicted RBP15.2■□□□□ 0.02
USP28-214ENST00000545540 TRAPPC9Q96Q05 1148 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 PTPN18Q99952 460 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 DSEQ9UL01 958 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 SNX13Q9Y5W8 968 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 XPOTO43592 962 aaKnown RBP15.19■□□□□ 0.02
USP28-214ENST00000545540 TOMM70O94826 608 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 CHRM1P11229 460 aaPredicted RBP15.19■□□□□ 0.02
USP28-214ENST00000545540 KCNE1P15382 129 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 CES1P23141 567 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 PSEN2P49810 448 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 CBLBQ13191 982 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 HNRNPDQ14103 355 aaKnown RBP15.19■□□□□ 0.02
USP28-214ENST00000545540 GEN1Q17RS7 908 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 MYO1HQ8N1T3 1032 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 GPR78Q96P69 363 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 SGIP1Q9BQI5 828 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 ALG9Q9H6U8 611 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 NT5MQ9NPB1 228 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 FAM149AA5PLN7 773 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 GABRDO14764 452 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 TBX18O95935 607 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 F2P00734 622 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 CKMT2P17540 419 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 PRKAA1Q13131 559 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 TOP6BLQ8N6T0 577 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 JADE3Q92613 823 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 CASP10Q92851 521 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 PPWD1Q96BP3 646 aaKnown RBP15.19■□□□□ 0.02
USP28-214ENST00000545540 PPP1R10Q96QC0 940 aaKnown RBP15.19■□□□□ 0.02
USP28-214ENST00000545540 CIB1Q99828 191 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 ADAM28Q9UKQ2 775 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 FBXO5Q9UKT4 447 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 ACTL7AQ9Y615 435 aa15.19■□□□□ 0.02
USP28-214ENST00000545540 SMIM35A0A1B0GVV1 85 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 ARL5CA6NH57 179 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 J3KR12 359 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 SDHDO14521 159 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 SIX3O95343 332 aaPredicted RBP15.18■□□□□ 0.02
USP28-214ENST00000545540 THP07101 528 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 MYL4P12829 197 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 ME2P23368 584 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 NPY2RP49146 381 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 NADK2Q4G0N4 442 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 CXCL17Q6UXB2 119 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 BNIPLQ7Z465 357 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 EME1Q96AY2 570 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 MS4A4AQ96JQ5 239 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 PIF1Q9H611 641 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 ZBTB26Q9HCK0 441 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 DNAJB4Q9UDY4 337 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 A0A0U1RQS6 177 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 HHLA1C9JL84 531 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 CABYRO75952 493 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 SUPT7LO94864 414 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 CHRM3P20309 590 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 GPR15P49685 360 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 PRAMEP78395 509 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 GPR158Q5T848 1215 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 MFN1Q8IWA4 741 aa15.18■□□□□ 0.02
USP28-214ENST00000545540 ARHGAP12Q8IWW6 846 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms