RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ZMPSTE24O75844 475 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 SRPRAP08240 638 aaKnown RBP9.66□□□□□ -0.86
YBX3-215ENST00000544504 TPSB2P20231 275 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 CA4P22748 312 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 MZF1P28698 734 aaPredicted RBP9.66□□□□□ -0.86
YBX3-215ENST00000544504 CNR2P34972 360 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 MAGEA6P43360 314 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 MAPK8P45983 427 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 RPL21P46778 160 aaKnown RBP9.66□□□□□ -0.86
YBX3-215ENST00000544504 LMAN1P49257 510 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 VPS41P49754 854 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 CCR3P51677 355 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 GEMP55040 296 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 GDF10P55107 478 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 BASP1P80723 227 aaKnown RBP9.66□□□□□ -0.86
YBX3-215ENST00000544504 ECT2LQ008S8 904 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 NSUN2Q08J23 767 aaKnown RBP eCLIP9.66□□□□□ -0.86
YBX3-215ENST00000544504 SEMA5AQ13591 1074 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 GRM2Q14416 872 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 TRIP13Q15645 432 aaPredicted RBP9.66□□□□□ -0.86
YBX3-215ENST00000544504 TPSAB1Q15661 275 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 PITRM1Q5JRX3 1037 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 TRIM68Q6AZZ1 485 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 UNQ6494/PRO21346Q6UXR6 183 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 TP53INP2Q8IXH6 220 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 ETFBKMTQ8IXQ9 262 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 KDF1Q8NAX2 398 aaPredicted RBP9.66□□□□□ -0.86
YBX3-215ENST00000544504 KDM1BQ8NB78 822 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 OR52K2Q8NGK3 314 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 CCDC110Q8TBZ0 833 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 UCMAQ8WVF2 138 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 IFT81Q8WYA0 676 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 TTC17Q96AE7 1141 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 ISG20Q96AZ6 181 aaKnown RBP9.66□□□□□ -0.86
YBX3-215ENST00000544504 LMLNQ96KR4 655 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 AGAP3Q96P47 875 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 PSKH2Q96QS6 385 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 FCRL5Q96RD9 977 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 PARD6BQ9BYG5 372 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 PLA2G2FQ9BZM2 168 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 PHACTR1Q9C0D0 580 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 CEP44Q9C0F1 390 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 SLC25A51Q9H1U9 297 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 CHRDQ9H2X0 955 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 C8orf33Q9H7E9 229 aaPredicted RBP9.66□□□□□ -0.86
YBX3-215ENST00000544504 C10orf88Q9H8K7 445 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 GLOD4Q9HC38 313 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 HPS4Q9NQG7 708 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 VPS45Q9NRW7 570 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 VPS51Q9UID3 782 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 ATP8A1Q9Y2Q0 1164 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 COL4A3Q01955 1670 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 ITPR1Q14643 2758 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 MAN2B1O00754 1011 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 TM4SF5O14894 197 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 NPC1O15118 1278 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 ZBTB24O43167 697 aaPredicted RBP9.65□□□□□ -0.86
YBX3-215ENST00000544504 PEX11BO96011 259 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 ZSCAN5DPP0CG00 497 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 IVDP26440 423 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 HLA-FP30511 346 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 CD70P32970 193 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 GJA4P35212 333 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 CSNK1DP48730 415 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 SERPINH1P50454 418 aaKnown RBP9.65□□□□□ -0.86
YBX3-215ENST00000544504 PLTPP55058 493 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 ST8SIA6P61647 398 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 MRPS25P82663 173 aaKnown RBP9.65□□□□□ -0.86
YBX3-215ENST00000544504 RAD51Q06609 339 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 ZBTB17Q13105 803 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 MPP3Q13368 585 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 GRM3Q14832 879 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 MBLAC2Q68D91 279 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 ALG1LQ6GMV1 187 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 HIBCHQ6NVY1 386 aaPredicted RBP9.65□□□□□ -0.86
YBX3-215ENST00000544504 EMBQ6PCB8 327 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 CCNI2Q6ZMN8 369 aaPredicted RBP9.65□□□□□ -0.86
YBX3-215ENST00000544504 ARHGAP36Q6ZRI8 547 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 LINC00523Q86TU6 105 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 NAT16Q8N8M0 369 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 NETO2Q8NC67 525 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 WFDC5Q8TCV5 224 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 ART4Q93070 314 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 ZFYVE19Q96K21 471 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 PNKPQ96T60 521 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 FMO2Q99518 471 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 LRRC40Q9H9A6 602 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 XAB2Q9HCS7 855 aaKnown RBP9.65□□□□□ -0.86
YBX3-215ENST00000544504 NT5MQ9NPB1 228 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 PLA2G4CQ9UP65 541 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 HS3ST2Q9Y278 367 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 TTLL3Q9Y4R7 772 aa9.65□□□□□ -0.86
YBX3-215ENST00000544504 GCN1Q92616 2671 aaKnown RBP9.65□□□□□ -0.87
YBX3-215ENST00000544504 NYNRINQ9P2P1 1898 aaKnown RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 ESYT3A0FGR9 886 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 TMEM8BA6NDV4 472 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 C1QTNF9BB2RNN3 333 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 ARNTLO00327 626 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 DYNC1I1O14576 645 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms