RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-217	ENST00000543449	FADS3	Q9Y5Q0	445 aa		10.43	□□□□□ -0.74
NPIPB4-217	ENST00000543449	CFAP54	Q96N23	3096 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449		A6NNZ2	444 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	PLK4	O00444	970 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	FPGT	O14772	594 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	GIPC1	O14908	333 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	TNFSF14	O43557	240 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	CBFA2T3	O75081	653 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	PALM	O75781	387 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	UGT2B4	P06133	528 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	KRT7	P08729	469 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	TMEM253	P0C7T8	217 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	SERPINA4	P29622	427 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	MAN1A1	P33908	653 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	EIF4A3	P38919	411 aa	Known RBP	10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	PAPOLA	P51003	745 aa	Known RBP	10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	METAP1	P53582	386 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	POLR2L	P62875	67 aa	Known RBP	10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	FOXC1	Q12948	553 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	DPYS	Q14117	519 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	PDK2	Q15119	407 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	TMEM259	Q4ZIN3	620 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	RALGPS1	Q5JS13	557 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	AFMID	Q63HM1	303 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	ERAP2	Q6P179	960 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	SARM1	Q6SZW1	724 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	PARS2	Q7L3T8	475 aa	Known RBP	10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	TTC7B	Q86TV6	843 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	RHOT2	Q8IXI1	618 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	TMEM145	Q8NBT3	493 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	CXorf40A	Q8TE69	158 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	KLHL32	Q96NJ5	620 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	PEBP4	Q96S96	227 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	SLC17A9	Q9BYT1	436 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	MAGEB5	Q9BZ81	275 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	SLC39A8	Q9C0K1	460 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	ATP13A3	Q9H7F0	1226 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	EBF2	Q9HAK2	575 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	IL21R	Q9HBE5	538 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	PDF	Q9HBH1	243 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	LUC7L	Q9NQ29	371 aa	Known RBP	10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	ABHD10	Q9NUJ1	306 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	CWC15	Q9P013	229 aa	Known RBP	10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	FTSJ1	Q9UET6	329 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	SEPT3	Q9UH03	358 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	INTU	Q9ULD6	942 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	NEUROG3	Q9Y4Z2	214 aa		10.42	□□□□□ -0.74
NPIPB4-217	ENST00000543449	CHD5	Q8TDI0	1954 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	SPAAR	A0A1B0GVQ0	90 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	TMEM8B	A6NDV4	472 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	DFFA	O00273	331 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	SLC31A1	O15431	190 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	MFAP3L	O75121	409 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	PROSC	O94903	275 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	WNT1	P04628	370 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	C1S	P09871	688 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	THEGL	P0DJG4	465 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	RARA	P10276	462 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	KRT10	P13645	584 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	EPHA8	P29322	1005 aa	Predicted RBP	10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	ARHGAP25	P42331	645 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	SSR1	P43307	286 aa	Known RBP	10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	RABIF	P47224	123 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	AP1S1	P61966	158 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	NUMA1	Q14980	2115 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	CA9	Q16790	459 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	KYAT3	Q6YP21	454 aa	Known RBP	10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	POLN	Q7Z5Q5	900 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	ABI3BP	Q7Z7G0	1075 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	PAF1	Q8N7H5	531 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	BAHD1	Q8TBE0	780 aa	Predicted RBP	10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	ADAMTS14	Q8WXS8	1223 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	HSPH1	Q92598	858 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	CELF6	Q96J87	481 aa	Known RBP	10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	CSPG4P5	Q96PW8	444 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	C1QTNF2	Q9BXJ5	285 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	TRIM7	Q9C029	511 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	TRIM5	Q9C035	493 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	SUV39H2	Q9H5I1	410 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	KLHL11	Q9NVR0	708 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	KCTD5	Q9NXV2	234 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	IPO11	Q9UI26	975 aa	Known RBP	10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	NENF	Q9UMX5	172 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	PCDHGA1	Q9Y5H4	931 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	SLCO1B1	Q9Y6L6	691 aa		10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	ASCC3	Q8N3C0	2202 aa	Known RBP	10.41	□□□□□ -0.74
NPIPB4-217	ENST00000543449	TSPAN11	A1L157	253 aa		10.4	□□□□□ -0.74
NPIPB4-217	ENST00000543449	CFAP69	A5D8W1	941 aa		10.4	□□□□□ -0.74
NPIPB4-217	ENST00000543449	NEMP2	A6NFY4	417 aa		10.4	□□□□□ -0.74
NPIPB4-217	ENST00000543449	TMEM110-MUSTN1	A8MSY1	372 aa		10.4	□□□□□ -0.74
NPIPB4-217	ENST00000543449		H3BM21	787 aa		10.4	□□□□□ -0.74
NPIPB4-217	ENST00000543449	AREL1	O15033	823 aa		10.4	□□□□□ -0.74
NPIPB4-217	ENST00000543449	TM7SF2	O76062	418 aa		10.4	□□□□□ -0.74
NPIPB4-217	ENST00000543449	FTH1P19	P0C7X4	201 aa		10.4	□□□□□ -0.74
NPIPB4-217	ENST00000543449	ALPPL2	P10696	532 aa		10.4	□□□□□ -0.74
NPIPB4-217	ENST00000543449	MX2	P20592	715 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms