RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 RAD51BO15315 384 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 YKT6O15498 198 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 INSIG1O15503 277 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PCDH8O95206 1070 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 GYPCP04921 128 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 UGT2B4P06133 528 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 MYBL1P10243 752 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TCF4P15884 667 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 HNRNPA2B1P22626 353 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PCK1P35558 622 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 NDST2P52849 883 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CLDN2P57739 230 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TPI1P60174 286 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 RPS21P63220 83 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ZBED6P86452 979 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 KIAA1161Q6NSJ0 714 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 FBXL19Q6PCT2 694 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TMPRSS7Q7RTY8 843 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PSTKQ8IV42 348 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SLC25A45Q8N413 288 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 RYBPQ8N488 228 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 OXR1Q8N573 874 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 RAB7BQ96AH8 199 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 KLHDC7BQ96G42 594 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 FEM1CQ96JP0 617 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 KLHL32Q96NJ5 620 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 MYOCQ99972 504 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 OSBPL1AQ9BXW6 950 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SLC39A8Q9C0K1 460 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 DHX35Q9H5Z1 703 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 KLHL11Q9NVR0 708 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 BZW2Q9Y6E2 419 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TDRD6O60522 2096 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 FAM208BQ5VWN6 2430 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SMG1Q96Q15 3661 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 A0A087X0T9 212 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 POM121BA6NF01 834 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 IGLON5A6NGN9 336 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 EEF2KO00418 725 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 MAGEC1O60732 1142 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PRAMEF11O60813 436 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PAK4O96013 591 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SERPING1P05155 500 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ITGAVP06756 1048 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 FAM228BP0C875 321 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 THEGLP0DJG4 465 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TIMP2P16035 220 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ITIH2P19823 946 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 HCAR3P49019 387 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ARRB1P49407 418 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PAPOLAP51003 745 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 DPYSQ14117 519 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 GDPD4Q6W3E5 623 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 RFX8Q6ZV50 586 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TP53INP2Q8IXH6 220 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 NPWQ8N729 165 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 OR13H1Q8NG92 308 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ASB12Q8WXK4 309 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TSC1Q92574 1164 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TRIM11Q96F44 468 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CELF6Q96J87 481 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 GDAP1L1Q96MZ0 367 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 LENG8Q96PV6 779 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CPEB1Q9BZB8 566 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CWC15Q9P013 229 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 IFNKQ9P0W0 207 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 MYO1AQ9UBC5 1043 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 DKK3Q9UBP4 350 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ITM2BQ9Y287 266 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SCINQ9Y6U3 715 aa13.29□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TAF4O00268 1085 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TSPAN6O43657 245 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PRPSAP2O60256 369 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 BUB1BO60566 1050 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 RNF8O76064 485 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 IGSF6O95976 241 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CYP1A2P05177 515 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 GIMD1P0DJR0 217 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ERCC2P18074 760 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 AKT2P31751 481 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 HNRNPH3P31942 346 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TPM4P67936 248 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SMAD1Q15797 465 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 DPYSL2Q16555 572 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TPRG1LQ5T0D9 272 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TXNRD3NBQ6F5E7 133 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ARHGAP36Q6ZRI8 547 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 MARCH9Q86YJ5 346 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 EID2Q8N6I1 236 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 HCAR2Q8TDS4 363 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CPLX3Q8WVH0 158 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ARHGEF26Q96DR7 871 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 NSMCE3Q96MG7 304 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 THAP2Q9H0W7 228 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 MRPL47Q9HD33 250 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 DONSONQ9NYP3 566 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 UBA2Q9UBT2 640 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 FTSJ1Q9UET6 329 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ZMIZ1Q9ULJ6 1067 aa13.28□□□□□ -0.28
TNFRSF1A-215ENST00000543359 IGSF10Q6WRI0 2623 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms