RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 INO80DQ53TQ3 878 aaPredicted RBP9.44□□□□□ -0.9
GNE-206ENST00000543356 FSCBQ5H9T9 825 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 AP1ARQ63HQ0 302 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 MFN1Q8IWA4 741 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 UNC5BQ8IZJ1 945 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 DDI1Q8WTU0 396 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 USP13Q92995 863 aaPredicted RBP9.44□□□□□ -0.9
GNE-206ENST00000543356 ALG14Q96F25 216 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 FEM1AQ9BSK4 669 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 PBX4Q9BYU1 374 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 SMG9Q9H0W8 520 aaKnown RBP9.44□□□□□ -0.9
GNE-206ENST00000543356 EPN3Q9H201 632 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 KIF9Q9HAQ2 790 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 KCNK9Q9NPC2 374 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 CHRAC1Q9NRG0 131 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 NKIRAS1Q9NYS0 192 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 CCL26Q9Y258 94 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 CCDC195A0A1B0GUA6 201 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 CBX4O00257 560 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 UGT1A9O60656 530 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 MT-ND3P03897 115 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 CYBBP04839 570 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 SERPINF2P08697 491 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 ATXN1LP0C7T5 689 aaKnown RBP9.43□□□□□ -0.9
GNE-206ENST00000543356 CR2P20023 1033 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 HLA-DPA1P20036 260 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 ADRA1DP25100 572 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 MZF1P28698 734 aaPredicted RBP9.43□□□□□ -0.9
GNE-206ENST00000543356 SERPINH1P50454 418 aaKnown RBP9.43□□□□□ -0.9
GNE-206ENST00000543356 MPP2Q14168 576 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 CYTH1Q15438 398 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 SLC1A5Q15758 541 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 ZNF77Q15935 545 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 FYB2Q5VWT5 728 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 CES3Q6UWW8 571 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 PACS1Q6VY07 963 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 GRASPQ7Z6J2 395 aaPredicted RBP9.43□□□□□ -0.9
GNE-206ENST00000543356 UGT1A7Q9HAW7 530 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 UGT1A10Q9HAW8 530 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 UGT1A8Q9HAW9 530 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 PPANQ9NQ55 473 aaKnown RBP9.43□□□□□ -0.9
GNE-206ENST00000543356 TDP1Q9NUW8 608 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 ZFATQ9P243 1243 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 VPS28Q9UK41 221 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.43□□□□□ -0.9
GNE-206ENST00000543356 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.43□□□□□ -0.9
GNE-206ENST00000543356 HEATR9A2RTY3 570 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 TRIM49D1C9J1S8 452 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 CD160O95971 181 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 FGF1P05230 155 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 KRT4P19013 534 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 NMBRP28336 390 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 WEE1P30291 646 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 CCNFP41002 786 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 CHRNA4P43681 627 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 NTHL1P78549 312 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 SLC18A2Q05940 514 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 DNAJC3Q13217 504 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 MSLNQ13421 630 aaPredicted RBP9.43□□□□□ -0.9
GNE-206ENST00000543356 POU6F1Q14863 301 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 SIRPB2Q5JXA9 342 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 PDPK2PQ6A1A2 396 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 TIFABQ6ZNK6 161 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 SH2D5Q6ZV89 423 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 KCNMB4Q86W47 210 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 C4orf33Q8N1A6 199 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 KIAA1958Q8N8K9 716 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 BANPQ8N9N5 519 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 FIBINQ8TAL6 211 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 RIN3Q8TB24 985 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 WFDC5Q8TCV5 224 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 DENND1AQ8TEH3 1009 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 MFSD3Q96ES6 412 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 NUDCD1Q96RS6 583 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 CDCA3Q99618 268 aaPredicted RBP9.43□□□□□ -0.9
GNE-206ENST00000543356 CPNE1Q99829 537 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 TACO1Q9BSH4 297 aaKnown RBP9.43□□□□□ -0.9
GNE-206ENST00000543356 NKX2-4Q9H2Z4 354 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 TLE6Q9H808 572 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 MKS1Q9NXB0 559 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 NSMCE4AQ9NXX6 385 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 KIAA1522Q9P206 1035 aaPredicted RBP9.43□□□□□ -0.9
GNE-206ENST00000543356 VPS51Q9UID3 782 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 MSRAQ9UJ68 235 aa9.43□□□□□ -0.9
GNE-206ENST00000543356 INSIG1O15503 277 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 TMCC1O94876 653 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 ZWINTO95229 277 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 PAPSS2O95340 614 aaPredicted RBP9.42□□□□□ -0.9
GNE-206ENST00000543356 ERVK-10P10266 1014 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 CEBPBP17676 345 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 GP5P40197 560 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 PLK1P53350 603 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 CDK18Q07002 472 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 SLC12A1Q13621 1099 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 TBC1D25Q3MII6 688 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 RALGPS1Q5JS13 557 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 GRTP1Q5TC63 336 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 PPP2R2DQ66LE6 453 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 KIAA0930Q6ICG6 404 aaPredicted RBP9.42□□□□□ -0.9
GNE-206ENST00000543356 RBM23Q86U06 439 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms