RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 EPOPA6NHQ4 379 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 PRPF4O43172 522 aaKnown RBP eCLIP16.1■□□□□ 0.17
USP5-207ENST00000542371 SNAP91O60641 907 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 TMCC1O94876 653 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 PAPSS2O95340 614 aaPredicted RBP16.1■□□□□ 0.17
USP5-207ENST00000542371 NDST3O95803 873 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 ALADP13716 330 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 PAMP19021 973 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 CSNK1DP48730 415 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 PLEKHG6Q3KR16 790 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 PDPK2PQ6A1A2 396 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 TMC5Q6UXY8 1006 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 GPR149Q86SP6 731 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 TDHQ8IZJ6 230 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 C12orf76Q8N812 135 aaPredicted RBP16.1■□□□□ 0.17
USP5-207ENST00000542371 RIN3Q8TB24 985 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 ITFG1Q8TB96 612 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 PEX13Q92968 403 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 TIFAQ96CG3 184 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 TRIM56Q9BRZ2 755 aaKnown RBP16.1■□□□□ 0.17
USP5-207ENST00000542371 NSUN3Q9H649 340 aaKnown RBP16.1■□□□□ 0.17
USP5-207ENST00000542371 CHRAC1Q9NRG0 131 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 OBP2AQ9NY56 170 aa16.1■□□□□ 0.17
USP5-207ENST00000542371 MIA3Q5JRA6 1907 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 DOCK6Q96HP0 2047 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 MT-ND3P03897 115 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 ATXN1LP0C7T5 689 aaKnown RBP16.09■□□□□ 0.17
USP5-207ENST00000542371 CA4P22748 312 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 FSHRP23945 695 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 MAPK8P45983 427 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 GNGT1P63211 74 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 MSLNQ13421 630 aaPredicted RBP16.09■□□□□ 0.17
USP5-207ENST00000542371 IHHQ14623 411 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 SIRPB2Q5JXA9 342 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 GRTP1Q5TC63 336 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 TIFABQ6ZNK6 161 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 RASSF3Q86WH2 238 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 TMEM25Q86YD3 366 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 ADGRG2Q8IZP9 1017 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 APCDD1Q8J025 514 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 SLC25A41Q8N5S1 370 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 EFHBQ8N7U6 833 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 GABPB2Q8TAK5 448 aaPredicted RBP16.09■□□□□ 0.17
USP5-207ENST00000542371 ING5Q8WYH8 240 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 CPNE1Q99829 537 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 NOD2Q9HC29 1040 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 PPANQ9NQ55 473 aaKnown RBP16.09■□□□□ 0.17
USP5-207ENST00000542371 GDE1Q9NZC3 331 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 ZFATQ9P243 1243 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 LHX3Q9UBR4 397 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 RIMKLBQ9ULI2 386 aa16.09■□□□□ 0.17
USP5-207ENST00000542371 TMEM120BA0PK00 339 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 FAM47DPA6NHR8 397 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 CHN1P15882 459 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 HOXB8P17481 243 aaPredicted RBP16.08■□□□□ 0.16
USP5-207ENST00000542371 NMBRP28336 390 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 GP5P40197 560 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 CHRNA4P43681 627 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 RGRP47804 291 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 SCNN1BP51168 640 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 CSE1LP55060 971 aaKnown RBP16.08■□□□□ 0.16
USP5-207ENST00000542371 RHOAP61586 193 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 AP1S1P61966 158 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 SULT2A1Q06520 285 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 POU6F1Q14863 301 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 PITRM1Q5JRX3 1037 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 RARS2Q5T160 578 aaKnown RBP16.08■□□□□ 0.16
USP5-207ENST00000542371 KIAA0930Q6ICG6 404 aaPredicted RBP16.08■□□□□ 0.16
USP5-207ENST00000542371 NCEH1Q6PIU2 408 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 CES3Q6UWW8 571 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 PACS1Q6VY07 963 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 KIAA0907Q7Z7F0 614 aaPredicted RBP16.08■□□□□ 0.16
USP5-207ENST00000542371 KCNMB4Q86W47 210 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.08■□□□□ 0.16
USP5-207ENST00000542371 MFSD3Q96ES6 412 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 SGSM3Q96HU1 749 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 TRIB3Q96RU7 358 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 BBS2Q9BXC9 721 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 TRPV4Q9HBA0 871 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 KCNK9Q9NPC2 374 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 TREX1Q9NSU2 369 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 C20orf96Q9NUD7 363 aaPredicted RBP16.08■□□□□ 0.16
USP5-207ENST00000542371 INTS9Q9NV88 658 aaKnown RBP16.08■□□□□ 0.16
USP5-207ENST00000542371 NKIRAS1Q9NYS0 192 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 PLK2Q9NYY3 685 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 LMCD1Q9NZU5 365 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.08■□□□□ 0.16
USP5-207ENST00000542371 TXNDC16Q9P2K2 825 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 ACTL7AQ9Y615 435 aa16.08■□□□□ 0.16
USP5-207ENST00000542371 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.07■□□□□ 0.16
USP5-207ENST00000542371 A0A1W2PPM1 405 aa16.07■□□□□ 0.16
USP5-207ENST00000542371 TTC24A2A3L6 582 aaPredicted RBP16.07■□□□□ 0.16
USP5-207ENST00000542371 SIN3BO75182 1162 aa16.07■□□□□ 0.16
USP5-207ENST00000542371 ERVK-10P10266 1014 aa16.07■□□□□ 0.16
USP5-207ENST00000542371 CREB1P16220 341 aa16.07■□□□□ 0.16
USP5-207ENST00000542371 CD70P32970 193 aa16.07■□□□□ 0.16
USP5-207ENST00000542371 GUCY1A3Q02108 690 aa16.07■□□□□ 0.16
USP5-207ENST00000542371 SLC18A2Q05940 514 aa16.07■□□□□ 0.16
USP5-207ENST00000542371 ILF2Q12905 390 aaKnown RBP16.07■□□□□ 0.16
USP5-207ENST00000542371 CBX2Q14781 532 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms