RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 PEX6Q13608 980 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 TRIM40Q6P9F5 258 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 ZNF567Q8N184 647 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 CHST4Q8NCG5 386 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 DHRS1Q96LJ7 313 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 FCRL4Q96PJ5 515 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 TMEM51Q9NW97 253 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 SLC6A2P23975 617 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 FXR2P51116 673 aaKnown RBP eCLIP15.49■□□□□ 0.07
HMGA2-210ENST00000541363 RAD9BQ6WBX8 426 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 MCEMP1Q8IX19 187 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 CD101Q93033 1021 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 SP140LQ9H930 580 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 GPATCH2LQ9NWQ4 482 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 CDH7Q9ULB5 785 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 HACD1B0YJ81 288 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 ATP4AP20648 1035 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 NR1H2P55055 460 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 MAZP56270 477 aaKnown RBP15.49■□□□□ 0.07
HMGA2-210ENST00000541363 WDR93Q6P2C0 686 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 OR8H1Q8NGG4 311 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 AASDHPPTQ9NRN7 309 aa15.49■□□□□ 0.07
HMGA2-210ENST00000541363 LEF1Q9UJU2 399 aaPredicted RBP15.49■□□□□ 0.07
HMGA2-210ENST00000541363 TRDMT1O14717 391 aaKnown RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 TSPAN1O60635 241 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 FSHRP23945 695 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 RPA1P27694 616 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 DEF8Q6ZN54 512 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 SNX20Q7Z614 316 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 ZNF554Q86TJ5 538 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 CKAP2Q8WWK9 683 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 KCNK4Q9NYG8 393 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 SAMHD1Q9Y3Z3 626 aaKnown RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 DNMT1P26358 1616 aaKnown RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 DCLK1O15075 740 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 SLC7A2P52569 658 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 PDK3Q15120 406 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 GALNT7Q86SF2 657 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 RAB43Q86YS6 212 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 SFRP1Q8N474 314 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 OR4A15Q8NGL6 344 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 RXFP2Q8WXD0 754 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 EXD2Q9NVH0 621 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 MTMR4Q9NYA4 1195 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 TSPAN3O60637 253 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 RPL14P50914 215 aaKnown RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 S100A12P80511 92 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 ZDHHC17Q8IUH5 632 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 SIPA1Q96FS4 1042 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 SENP6Q9GZR1 1112 aaPredicted RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 CCNKO75909 580 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 HOXB8P17481 243 aaPredicted RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 OGNP20774 298 aaKnown RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 GRK5P34947 590 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 TUBP50607 506 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 RTL4Q6ZR62 310 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 ZNF75CPQ92670 426 aaPredicted RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 GSG1L2A8MUP6 293 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 RIPK2O43353 540 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 PLK1P53350 603 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 ZNF234Q14588 700 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 ACAP2Q15057 778 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 NFE2Q16621 373 aaPredicted RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 ANKRD26P1Q6NSI1 321 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 TXNDC11Q6PKC3 985 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 FAM81AQ8TBF8 368 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 ERGIC2Q96RQ1 377 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 CDHR5Q9HBB8 845 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 ATP13A1Q9HD20 1204 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 INTS10Q9NVR2 710 aaKnown RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 RPS6KA4O75676 772 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 TPH1P17752 444 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 PFKFB4Q16877 469 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 DET1Q7L5Y6 550 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 MGME1Q9BQP7 344 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 CYP3A43Q9HB55 503 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 EMC3Q9P0I2 261 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 KANSL3Q9P2N6 904 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 C2CD2Q9Y426 696 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 CDK9P50750 372 aaKnown RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 MPPE1Q53F39 396 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 ZNF548Q8NEK5 533 aaPredicted RBP15.48■□□□□ 0.07
HMGA2-210ENST00000541363 CXorf40BQ96DE9 158 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 C12orf66Q96MD2 445 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 PNPLA3Q9NST1 481 aa15.48■□□□□ 0.07
HMGA2-210ENST00000541363 UGT2B17O75795 530 aa15.47■□□□□ 0.07
HMGA2-210ENST00000541363 CATP04040 527 aaKnown RBP15.47■□□□□ 0.07
HMGA2-210ENST00000541363 CYP17A1P05093 508 aa15.47■□□□□ 0.07
HMGA2-210ENST00000541363 TFPIP10646 304 aa15.47■□□□□ 0.07
HMGA2-210ENST00000541363 DNASE1L1P49184 302 aa15.47■□□□□ 0.07
HMGA2-210ENST00000541363 CAV3P56539 151 aa15.47■□□□□ 0.07
HMGA2-210ENST00000541363 TMC7Q7Z402 723 aa15.47■□□□□ 0.07
HMGA2-210ENST00000541363 ZSWIM2Q8NEG5 633 aa15.47■□□□□ 0.07
HMGA2-210ENST00000541363 SEMA4BQ9NPR2 832 aaPredicted RBP15.47■□□□□ 0.07
HMGA2-210ENST00000541363 CDH5P33151 784 aaPredicted RBP15.47■□□□□ 0.07
HMGA2-210ENST00000541363 FAM91A1Q658Y4 838 aa15.47■□□□□ 0.07
HMGA2-210ENST00000541363 HASPINQ8TF76 798 aa15.47■□□□□ 0.07
HMGA2-210ENST00000541363 KCNIP3Q9Y2W7 256 aa15.47■□□□□ 0.07
HMGA2-210ENST00000541363 GPSM3Q9Y4H4 160 aa15.47■□□□□ 0.07
HMGA2-210ENST00000541363 SAGE2PA6NJ88 616 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms