RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 COL6A2P12110 1019 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 ZNF26P17031 533 aaPredicted RBP9.65□□□□□ -0.86
CNOT4-212ENST00000541284 SLC1A2P43004 574 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 PRKAA2P54646 552 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 CTBP1Q13363 440 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 ZNF789Q5FWF6 425 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 AFMIDQ63HM1 303 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 C16orf89Q6UX73 402 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 SH3RF2Q8TEC5 729 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 EDEM1Q92611 657 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 USP13Q92995 863 aaPredicted RBP9.65□□□□□ -0.86
CNOT4-212ENST00000541284 NPAS2Q99743 824 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 TKTL2Q9H0I9 626 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 ZNF696Q9H7X3 374 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 WDR41Q9HAD4 459 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 RUVBL2Q9Y230 463 aaKnown RBP9.65□□□□□ -0.86
CNOT4-212ENST00000541284 MTF2Q9Y483 593 aaPredicted RBP9.65□□□□□ -0.86
CNOT4-212ENST00000541284 KLHL33A6NCF5 533 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 TRIM24O15164 1050 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 MTSS1O43312 755 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 NPHS1O60500 1241 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 ZNF189O75820 626 aaPredicted RBP9.65□□□□□ -0.86
CNOT4-212ENST00000541284 DDHD2O94830 711 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 NCAM1P13591 858 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 PMLP29590 882 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 ZNF33AQ06730 810 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 SLC12A1Q13621 1099 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 PABPC1LQ4VXU2 614 aaKnown RBP9.65□□□□□ -0.86
CNOT4-212ENST00000541284 CD300LGQ6UXG3 332 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 CCDC117Q8IWD4 279 aaPredicted RBP9.65□□□□□ -0.86
CNOT4-212ENST00000541284 RNF148Q8N7C7 305 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 C2CD4AQ8NCU7 369 aaPredicted RBP9.65□□□□□ -0.86
CNOT4-212ENST00000541284 TRPV1Q8NER1 839 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 BHLHE22Q8NFJ8 381 aaPredicted RBP9.65□□□□□ -0.86
CNOT4-212ENST00000541284 PDCD6IPQ8WUM4 868 aaKnown RBP9.65□□□□□ -0.86
CNOT4-212ENST00000541284 SENP8Q96LD8 212 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 OMDQ99983 421 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 CENPKQ9BS16 269 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 VTI1BQ9UEU0 232 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 RAB26Q9ULW5 256 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 G3BP2Q9UN86 482 aaKnown RBP9.65□□□□□ -0.86
CNOT4-212ENST00000541284 COMMD3-BMI1R4GMX3 469 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 ATG2AQ2TAZ0 1938 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 MIA3Q5JRA6 1907 aa9.65□□□□□ -0.86
CNOT4-212ENST00000541284 NEMP2A6NFY4 417 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 PGM3O95394 542 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 TAS2R39P59534 338 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 DNAJB13P59910 316 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 RAB10P61026 200 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 CDC42EP1Q00587 391 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 LRP8Q14114 963 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 USP10Q14694 798 aaKnown RBP9.65□□□□□ -0.87
CNOT4-212ENST00000541284 GRAMD1BQ3KR37 738 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 IQSEC1Q6DN90 963 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 ITPRIPL1Q6GPH6 555 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 PAOXQ6QHF9 649 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 ISLR2Q6UXK2 745 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 FAM156AQ8NDB6 213 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 FCRL5Q96RD9 977 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 OLFM1Q99784 485 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 TINF2Q9BSI4 451 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 UNKQ9C0B0 810 aaKnown RBP9.65□□□□□ -0.87
CNOT4-212ENST00000541284 SENP6Q9GZR1 1112 aaPredicted RBP9.65□□□□□ -0.87
CNOT4-212ENST00000541284 COPS7BQ9H9Q2 264 aaPredicted RBP9.65□□□□□ -0.87
CNOT4-212ENST00000541284 ARHGEF38Q9NXL2 777 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 RNF11Q9Y3C5 154 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 TLL2Q9Y6L7 1015 aa9.65□□□□□ -0.87
CNOT4-212ENST00000541284 C7orf72A4D263 438 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 PEX11BO96011 259 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 C8BP07358 591 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 CHRNA4P43681 627 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 C1QTNF8P60827 252 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 FLOT2Q14254 428 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 TECRLQ5HYJ1 363 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 PCID2Q5JVF3 399 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 RBM20Q5T481 1227 aaKnown RBP9.64□□□□□ -0.87
CNOT4-212ENST00000541284 DCLRE1AQ6PJP8 1040 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 GK5Q6ZS86 529 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 PNPLA1Q8N8W4 532 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 ICA1LQ8NDH6 482 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 SPPL2BQ8TCT7 592 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 TBL1YQ9BQ87 522 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 PAAF1Q9BRP4 392 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 UBE2OQ9C0C9 1292 aaKnown RBP9.64□□□□□ -0.87
CNOT4-212ENST00000541284 TMLHEQ9NVH6 421 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 HSFX1Q9UBD0 423 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 CDYLQ9Y232 598 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 TIMM13Q9Y5L4 95 aaPredicted RBP9.64□□□□□ -0.87
CNOT4-212ENST00000541284 AP4B1Q9Y6B7 739 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 FAM95CA0A1B0GW59 222 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 VAPBO95292 243 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 RBBP5Q15291 538 aaKnown RBP9.64□□□□□ -0.87
CNOT4-212ENST00000541284 SLC14A2Q15849 920 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 PDCD2Q16342 344 aaPredicted RBP9.64□□□□□ -0.87
CNOT4-212ENST00000541284 SLC5A9Q2M3M2 681 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 C6orf10Q5SRN2 563 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 PRAMEF19Q5SWL8 479 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 ARMC3Q5W041 872 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 RPS27LQ71UM5 84 aaKnown RBP9.64□□□□□ -0.87
CNOT4-212ENST00000541284 CHERPQ8IWX8 916 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms