RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 MGME1Q9BQP7 344 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 ERP44Q9BS26 406 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 MLPHQ9BV36 600 aaPredicted RBP9.47□□□□□ -0.89
DDX55-208ENST00000541259 GBA3Q9H227 469 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 DPH5Q9H2P9 285 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 TMEM245Q9H330 911 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 ETNK1Q9HBU6 452 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 NOD2Q9HC29 1040 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 CACNA2D2Q9NY47 1150 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 UBP1Q9NZI7 540 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 PAK5Q9P286 719 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 ASIC3Q9UHC3 531 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 RSPH14Q9UHP6 348 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 EVLQ9UI08 416 aaPredicted RBP9.47□□□□□ -0.89
DDX55-208ENST00000541259 SNX24Q9Y343 169 aa9.47□□□□□ -0.89
DDX55-208ENST00000541259 LRRK1Q38SD2 2015 aa9.46□□□□□ -0.89
DDX55-208ENST00000541259 TCRBV7S3A2A0A539 114 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 ESYT3A0FGR9 886 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 EFCAB8A8MWE9 144 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 OPHN1O60890 802 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 HEXIM1O94992 359 aaKnown RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 KLF8O95600 359 aaPredicted RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 MT-CYBP00156 380 aaPredicted RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 TARSP26639 723 aaKnown RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 ACTN2P35609 894 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 ADCY8P40145 1251 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 CD86P42081 329 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 STARD6P59095 220 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 ST8SIA6P61647 398 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 SKOR1P84550 965 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 ZXDAP98168 799 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 GUCY2DQ02846 1103 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 PRKCQQ04759 706 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 NSUN2Q08J23 767 aaKnown RBP eCLIP9.46□□□□□ -0.9
DDX55-208ENST00000541259 FZD5Q13467 585 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 OLIG2Q13516 323 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 CCINQ13939 588 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 SPARCL1Q14515 664 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 PARP6Q2NL67 630 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 GLE1Q53GS7 698 aaKnown RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 CARD16Q5EG05 197 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 ANKRD22Q5VYY1 191 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 DUPD1Q68J44 220 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 PKN3Q6P5Z2 889 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 DPY19L3Q6ZPD9 716 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 SYDE1Q6ZW31 735 aaPredicted RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 SRLQ86TD4 932 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 BBS5Q8N3I7 341 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 PCDH20Q8N6Y1 951 aaKnown RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 ZNF513Q8N8E2 541 aaPredicted RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 CHST14Q8NCH0 376 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 OR2A12Q8NGT7 310 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 ISG20Q96AZ6 181 aaKnown RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 IMP4Q96G21 291 aaKnown RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 MSANTD3Q96H12 275 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 OXNAD1Q96HP4 312 aaPredicted RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 FCRL5Q96RD9 977 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 NUDCD1Q96RS6 583 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 FOXQ1Q9C009 403 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 CEP44Q9C0F1 390 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 POLR1EQ9GZS1 481 aaKnown RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 SLC25A51Q9H1U9 297 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 RAB6BQ9NRW1 208 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 HECAQ9UBI9 543 aaPredicted RBP9.46□□□□□ -0.9
DDX55-208ENST00000541259 STON1Q9Y6Q2 735 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 NUMA1Q14980 2115 aa9.46□□□□□ -0.9
DDX55-208ENST00000541259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.45□□□□□ -0.9
DDX55-208ENST00000541259 KANSL1LA0AUZ9 987 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 CFAP99D6REC4 459 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 DNALI1O14645 258 aaPredicted RBP9.45□□□□□ -0.9
DDX55-208ENST00000541259 TP73O15350 636 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 ADAM23O75077 832 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 SIN3BO75182 1162 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 PMPCBO75439 489 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 ZNF189O75820 626 aaPredicted RBP9.45□□□□□ -0.9
DDX55-208ENST00000541259 PIGNO95427 931 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 IGSF6O95976 241 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 ADH1BP00325 375 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 GSRP00390 522 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 EPHX1P07099 455 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 CHRNB1P11230 501 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 NNMTP40261 264 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 CSNK1DP48730 415 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 CCNHP51946 323 aaPredicted RBP9.45□□□□□ -0.9
DDX55-208ENST00000541259 BASP1P80723 227 aaKnown RBP9.45□□□□□ -0.9
DDX55-208ENST00000541259 KCNC4Q03721 635 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 ENPP2Q13822 863 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 UBXN2BQ14CS0 331 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 ERCC6LQ2NKX8 1250 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 MYLK3Q32MK0 819 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 HNRNPA1L2Q32P51 320 aaKnown RBP9.45□□□□□ -0.9
DDX55-208ENST00000541259 C9orf64Q5T6V5 341 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 IZUMO3Q5VZ72 239 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 ALG1LQ6GMV1 187 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 ITPRIPL1Q6GPH6 555 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 NCEH1Q6PIU2 408 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 KDELC1Q6UW63 502 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 SERPINA13PQ6UXR4 307 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 Q6ZS52 159 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 KDELC2Q7Z4H8 507 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms