RNA–Protein interactions for RNA: ENST00000541099.5

TRIT1-215, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-215ENST00000541099 CCDC13Q8IYE1 715 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 SYCE1Q8N0S2 351 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 TXLNBQ8N3L3 684 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 OR14C36Q8NHC7 312 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 ARRDC2Q8TBH0 407 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.84□□□□□ -0.51
TRIT1-215ENST00000541099 FATE1Q969F0 183 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 RBM41Q96IZ5 413 aaKnown RBP11.84□□□□□ -0.51
TRIT1-215ENST00000541099 HSPA12BQ96MM6 686 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 GDAP1L1Q96MZ0 367 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 KLHL32Q96NJ5 620 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 OMDQ99983 421 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 FAM118BQ9BPY3 351 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 CINPQ9BW66 212 aaPredicted RBP11.84□□□□□ -0.51
TRIT1-215ENST00000541099 TLR10Q9BXR5 811 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 MAK16Q9BXY0 300 aaKnown RBP11.84□□□□□ -0.51
TRIT1-215ENST00000541099 HDAC8Q9BY41 377 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 CEP41Q9BYV8 373 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 CPEB1Q9BZB8 566 aaKnown RBP11.84□□□□□ -0.51
TRIT1-215ENST00000541099 SGK2Q9HBY8 427 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 NOD2Q9HC29 1040 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 TRMT1Q9NXH9 659 aaKnown RBP11.84□□□□□ -0.51
TRIT1-215ENST00000541099 SEPT3Q9UH03 358 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 PILRBQ9UKJ0 227 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 FZD4Q9ULV1 537 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 ZFR2Q9UPR6 939 aaKnown RBP11.84□□□□□ -0.51
TRIT1-215ENST00000541099 ITM2BQ9Y287 266 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 SPAG17Q6Q759 2223 aa11.84□□□□□ -0.51
TRIT1-215ENST00000541099 THADAQ6YHU6 1953 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 TSPAN11A1L157 253 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 FAM47DPA6NHR8 397 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 C16orf96A6NNT2 1141 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 WNT9AO14904 365 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 RHOBTB1O94844 696 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 IGSF6O95976 241 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 JCHAINP01591 159 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 PRKCGP05129 697 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 RETP07949 1114 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 MMP2P08253 660 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 ADRB3P13945 408 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 ZFXP17010 805 aaPredicted RBP11.83□□□□□ -0.52
TRIT1-215ENST00000541099 TGM2P21980 687 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 ITGB7P26010 798 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 MMP13P45452 471 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 RECQLP46063 649 aaPredicted RBP11.83□□□□□ -0.52
TRIT1-215ENST00000541099 COPS2P61201 443 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 IFI35P80217 286 aaPredicted RBP11.83□□□□□ -0.52
TRIT1-215ENST00000541099 NSUN2Q08J23 767 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRIT1-215ENST00000541099 SPEM2Q0P670 501 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 TRAF2Q12933 501 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 HNRNPDQ14103 355 aaKnown RBP11.83□□□□□ -0.52
TRIT1-215ENST00000541099 TFDP2Q14188 446 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 FGL2Q14314 439 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 PTPRRQ15256 657 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 ELF2Q15723 593 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 ZNF805Q5CZA5 627 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 ALG1LQ6GMV1 187 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 TCEAL6Q6IPX3 200 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 GDPD4Q6W3E5 623 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 ERN2Q76MJ5 926 aaKnown RBP11.83□□□□□ -0.52
TRIT1-215ENST00000541099 DSG4Q86SJ6 1040 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 C11orf74Q86VG3 221 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 CCDC50Q8IVM0 306 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 CADM4Q8NFZ8 388 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 GANCQ8TET4 914 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 DNASE2BQ8WZ79 361 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 TCEAL3Q969E4 200 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 BIRC7Q96CA5 298 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 LOXL4Q96JB6 756 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 CCDC114Q96M63 670 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 SMIM14Q96QK8 99 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 IL12RB2Q99665 862 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 NT5MQ9NPB1 228 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 FSCN3Q9NQT6 498 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 RXFP3Q9NSD7 469 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 RBM22Q9NW64 420 aaKnown RBP eCLIP11.83□□□□□ -0.523e-6■■■■□ 26.3
TRIT1-215ENST00000541099 R3HDM2Q9Y2K5 976 aaKnown RBP11.83□□□□□ -0.52
TRIT1-215ENST00000541099 ATP8A1Q9Y2Q0 1164 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.83□□□□□ -0.52
TRIT1-215ENST00000541099 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRIT1-215ENST00000541099 FADS3Q9Y5Q0 445 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 TNRC6BQ9UPQ9 1833 aaKnown RBP11.83□□□□□ -0.52
TRIT1-215ENST00000541099 FAM186AA6NE01 2351 aa11.83□□□□□ -0.52
TRIT1-215ENST00000541099 MIF4GDA9UHW6 222 aaKnown RBP11.82□□□□□ -0.52
TRIT1-215ENST00000541099 AREL1O15033 823 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 NDUFS2O75306 463 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 PTMAP06454 111 aaKnown RBP11.82□□□□□ -0.52
TRIT1-215ENST00000541099 CCNB1P14635 433 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 MX2P20592 715 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 PTPN3P26045 913 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 CD68P34810 354 aaPredicted RBP11.82□□□□□ -0.52
TRIT1-215ENST00000541099 MPLP40238 635 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 SCNN1BP51168 640 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 OTUD4Q01804 1114 aaKnown RBP11.82□□□□□ -0.52
TRIT1-215ENST00000541099 BNC1Q01954 994 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 SEMG2Q02383 582 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 DSC2Q02487 901 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 CREB5Q02930 508 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 WASHC5Q12768 1159 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 NOMO1Q15155 1222 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms