RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ZNF324BQ6AW86 544 aaPredicted RBP6.31□□□□□ -1.4
YBX3-210ENST00000540975 C8orf82Q6P1X6 216 aaPredicted RBP6.31□□□□□ -1.4
YBX3-210ENST00000540975 C17orf99Q6UX52 265 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 CYP26C1Q6V0L0 522 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 MON1AQ86VX9 555 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 GCC1Q96CN9 775 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 RNF183Q96D59 192 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 CDT1Q9H211 546 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 EPHX3Q9H6B9 360 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 WDR26Q9H7D7 661 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 PCDHGB5Q9Y5G0 923 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 IGHV4-28A0A0C4DH34 117 aa6.3□□□□□ -1.4
YBX3-210ENST00000540975 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.3□□□□□ -1.4
YBX3-210ENST00000540975 CCT5P48643 541 aa6.3□□□□□ -1.4
YBX3-210ENST00000540975 TRAF3Q13114 568 aa6.3□□□□□ -1.4
YBX3-210ENST00000540975 KEAP1Q14145 624 aa6.3□□□□□ -1.4
YBX3-210ENST00000540975 CTTNQ14247 550 aaKnown RBP6.3□□□□□ -1.4
YBX3-210ENST00000540975 PRAMEF19Q5SWL8 479 aa6.3□□□□□ -1.4
YBX3-210ENST00000540975 ADGRG6Q86SQ4 1221 aa6.3□□□□□ -1.4
YBX3-210ENST00000540975 RBM23Q86U06 439 aaKnown RBP6.3□□□□□ -1.4
YBX3-210ENST00000540975 DENND6AQ8IWF6 608 aa6.3□□□□□ -1.4
YBX3-210ENST00000540975 RUFY2Q8WXA3 655 aa6.3□□□□□ -1.4
YBX3-210ENST00000540975 UBXN10Q96LJ8 280 aa6.3□□□□□ -1.4
YBX3-210ENST00000540975 SLCO5A1Q9H2Y9 848 aa6.3□□□□□ -1.4
YBX3-210ENST00000540975 SPATS2LQ9NUQ6 558 aaKnown RBP6.3□□□□□ -1.4
YBX3-210ENST00000540975 WWOXQ9NZC7 414 aa6.3□□□□□ -1.4
YBX3-210ENST00000540975 IFT80Q9P2H3 777 aaPredicted RBP6.3□□□□□ -1.4
YBX3-210ENST00000540975 A0A1B0GVM2 712 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 ARHGAP10A1A4S6 786 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 PAPSS2O95340 614 aaPredicted RBP6.29□□□□□ -1.4
YBX3-210ENST00000540975 CBSLP0DN79 551 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 CBSP35520 551 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.29□□□□□ -1.4
YBX3-210ENST00000540975 TAF12Q16514 161 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 ASIC2Q16515 512 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 EDRF1Q3B7T1 1238 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 DCAF6Q58WW2 860 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 MOB3CQ70IA8 216 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 RFWD2Q8NHY2 731 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 MAELQ96JY0 434 aaKnown RBP6.29□□□□□ -1.4
YBX3-210ENST00000540975 SLC25A33Q9BSK2 321 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 CLK4Q9HAZ1 481 aaKnown RBP6.29□□□□□ -1.4
YBX3-210ENST00000540975 CD93Q9NPY3 652 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 TMEM160Q9NX00 188 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 ANKRD10Q9NXR5 420 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 LUZP4Q9P127 313 aa6.29□□□□□ -1.4
YBX3-210ENST00000540975 PABPN1LA6NDY0 278 aaKnown RBP6.28□□□□□ -1.4
YBX3-210ENST00000540975 EBAG9O00559 213 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 TGFB3P10600 412 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 ZNF12P17014 697 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 MYF6P23409 242 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 RYKP34925 604 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 PPM1FP49593 454 aaPredicted RBP6.28□□□□□ -1.4
YBX3-210ENST00000540975 CXCR3P49682 368 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 PDLIM4P50479 330 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 BLKP51451 505 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 CYP4A11Q02928 519 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 NFATC4Q14934 902 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 PLCB4Q15147 1175 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 NADSYN1Q6IA69 706 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 LRRTM4Q86VH4 590 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 FJX1Q86VR8 437 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 FAM216AQ8WUB2 273 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 CTAGE1Q96RT6 745 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 EYA3Q99504 573 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 TM6SF1Q9BZW5 370 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 AGO1Q9UL18 857 aaKnown RBP6.28□□□□□ -1.4
YBX3-210ENST00000540975 SLC45A1Q9Y2W3 748 aa6.28□□□□□ -1.4
YBX3-210ENST00000540975 ACOT8O14734 319 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 KCNJ13O60928 360 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 FGF3P11487 239 aaPredicted RBP6.27□□□□□ -1.41
YBX3-210ENST00000540975 ITGB8P26012 769 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 PGM1P36871 562 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 MXI1P50539 228 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 ST3GAL1Q11201 340 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 ZRSR2Q15696 482 aaKnown RBP6.27□□□□□ -1.41
YBX3-210ENST00000540975 RETSATQ6NUM9 610 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 LMO3Q8TAP4 145 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 WASF1Q92558 559 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 TMEM51Q9NW97 253 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 NDRG3Q9UGV2 375 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 HSF4Q9ULV5 492 aa6.27□□□□□ -1.41
YBX3-210ENST00000540975 GOLGA6L10A0A0M3HER8 536 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 TYW5A2RUC4 315 aaKnown RBP6.26□□□□□ -1.41
YBX3-210ENST00000540975 CBY3A6NI87 242 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 TEX22C9J3V5 150 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 FCGR1AP12314 374 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 SRD5A1P18405 259 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 CNTFP26441 200 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 GPD2P43304 727 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 CLCN5P51795 746 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 BNC1Q01954 994 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 NFIL3Q16649 462 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 CAPRIN2Q6IMN6 1127 aaKnown RBP6.26□□□□□ -1.41
YBX3-210ENST00000540975 ZNF354CQ86Y25 554 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 LURAP1LQ8IV03 231 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 MB21D2Q8IYB1 491 aaPredicted RBP6.26□□□□□ -1.41
YBX3-210ENST00000540975 TNIP2Q8NFZ5 429 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 ELP4Q96EB1 424 aa6.26□□□□□ -1.41
YBX3-210ENST00000540975 FAM84BQ96KN1 310 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms