RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 CSMD1Q96PZ7 3565 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBC1D3DA0A087WVF3 549 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBC1D3IA0A087WXS9 549 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBC1D3EA0A087X179 549 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBC1D3KA0A087X1G2 549 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 GOLGA6L7A0A1B0GV03 622 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 A0A1W2PQJ5 194 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TCRBV5S1A1TA0A578 114 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 PMS2P1A4D2B8 440 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBC1D3FA6NER0 549 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBC1D3LB9A6J9 549 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TMX2-CTNND1H3BSU7 103 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 DDX3XO00571 662 aaKnown RBP eCLIP9.06□□□□□ -0.965e-28■■■■■ 29.1
TRAPPC1-202ENST00000540486 MID1O15344 667 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 NVLO15381 856 aaKnown RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 RNGTTO60942 597 aaKnown RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 PIAS2O75928 621 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 DDAH2O95865 285 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TRUB2O95900 331 aaKnown RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 GYPCP04921 128 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 CCDC172P0C7W6 258 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBC1D3HP0C7X1 549 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TFE3P19532 575 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TNFAIP3P21580 790 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 CASP14P31944 242 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 DCTP40126 519 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 POLE2P56282 527 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBX4P57082 545 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 SNX16P57768 344 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 RNASE9P60153 205 aaKnown RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 CYP4F2P78329 520 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 CENPCQ03188 943 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 ZNF177Q13360 481 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 LAPTM4AQ15012 233 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 CLEC16AQ2KHT3 1053 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 OTUD1Q5VV17 481 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 HGSNATQ68CP4 663 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBC1D3GQ6DHY5 549 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBC1D3CQ6IPX1 549 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 ACAD10Q6JQN1 1059 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TRIM72Q6ZMU5 477 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 MMS22LQ6ZRQ5 1243 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 CHST9Q7L1S5 443 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 KIAA0907Q7Z7F0 614 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TAC4Q86UU9 113 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 DNAAF5Q86Y56 855 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 PHF13Q86YI8 300 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 ZDHHC17Q8IUH5 632 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 FAM217AQ8IXS0 508 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBC1D3Q8IZP1 549 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 FBXO39Q8N4B4 442 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 OR14C36Q8NHC7 312 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 NT5C3BQ969T7 300 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 ARRDC3Q96B67 414 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 PLD4Q96BZ4 506 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 MOCOSQ96EN8 888 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 IFT43Q96FT9 208 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 NPY6RQ99463 290 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 XPO7Q9UIA9 1087 aaKnown RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 PCDHB11Q9Y5F2 797 aa9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 TP53BP1Q12888 1972 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC1-202ENST00000540486 ITIH6Q6UXX5 1313 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 RP1L1Q8IWN7 2480 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 EME2A4GXA9 379 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 KCNU1A8MYU2 1149 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 PRAMEF26H0Y7S4 382 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 K7ESM1 405 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 IRAK2O43187 625 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 HSF2BPO75031 334 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 PLEKP08567 350 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 HLA-FP30511 346 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 SLC6A4P31645 630 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 SLC8A1P32418 973 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 NOS2P35228 1153 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 FLT3P36888 993 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 SCNN1AP37088 669 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 ADPRHP54922 357 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 ZBED6P86452 979 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 NNTQ13423 1086 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 ASIC2Q16515 512 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 LINC01559Q495D7 138 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 MPPE1Q53F39 396 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 RAB6CQ53S08 254 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 FAM133BQ5BKY9 247 aaKnown RBP9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 ZC3H12AQ5D1E8 599 aaKnown RBP9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 ADGRF1Q5T601 910 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 NADSYN1Q6IA69 706 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 ZCCHC8Q6NZY4 707 aaKnown RBP9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 WDR59Q6PJI9 974 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 SARM1Q6SZW1 724 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 MAMDC2Q7Z304 686 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 DSG4Q86SJ6 1040 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 ADIPOR2Q86V24 386 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 JAMLQ86YT9 394 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 VSTM4Q8IW00 320 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 SRRM1Q8IYB3 904 aaKnown RBP9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 AHI1Q8N157 1196 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 JOSD2Q8TAC2 188 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms