RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 SUDS3Q9H7L9 328 aaPredicted RBP11.66□□□□□ -0.54
C11orf54-214ENST00000540113 CYP4F12Q9HCS2 524 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 ADAMTS6Q9UKP5 1117 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 POMPQ9Y244 141 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 AAR2Q9Y312 384 aaKnown RBP11.66□□□□□ -0.54
C11orf54-214ENST00000540113 PLXNA3P51805 1871 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 TMEM114B3SHH9 223 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 E9PAM4 449 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 J3KR12 359 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 MATN3O15232 486 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 SOAT2O75908 522 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 ZCCHC18P0CG32 403 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 HNRNPLP14866 589 aaKnown RBP eCLIP11.65□□□□□ -0.542e-8■■□□□ 12.7
C11orf54-214ENST00000540113 TFEBP19484 476 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 HOXC13P31276 330 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 CCR1P32246 355 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 CSRP3P50461 194 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 NUDT2P50583 147 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 RPL14P50914 215 aaKnown RBP11.65□□□□□ -0.54
C11orf54-214ENST00000540113 TAS2R39P59534 338 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 COG7P83436 770 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 TSPY1Q01534 308 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 SLC12A1Q13621 1099 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 RNF220Q5VTB9 566 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 LIPMQ5VYY2 423 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 KLHDC8BQ8IXV7 354 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 THEM5Q8N1Q8 247 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 PPHLN1Q8NEY8 458 aaKnown RBP11.65□□□□□ -0.54
C11orf54-214ENST00000540113 CAPNS2Q96L46 248 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 TSNARE1Q96NA8 513 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 FCRL5Q96RD9 977 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 IL12RB2Q99665 862 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 RNF186Q9NXI6 227 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 NOD1Q9Y239 953 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 ACOT9Q9Y305 439 aa11.65□□□□□ -0.54
C11orf54-214ENST00000540113 MATN2O00339 956 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 LIN7AO14910 233 aaPredicted RBP11.65□□□□□ -0.55
C11orf54-214ENST00000540113 CFLARO15519 480 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 BUD23O43709 281 aaKnown RBP11.65□□□□□ -0.55
C11orf54-214ENST00000540113 CACNG3O60359 315 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 AOC2O75106 756 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 CNTN5O94779 1100 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 TBX18O95935 607 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 GLDCP23378 1020 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 SP100P23497 879 aaPredicted RBP11.65□□□□□ -0.55
C11orf54-214ENST00000540113 PIK3R1P27986 724 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 PLK1P53350 603 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 ASPHQ12797 758 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 FRG1Q14331 258 aaKnown RBP11.65□□□□□ -0.55
C11orf54-214ENST00000540113 IHHQ14623 411 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 MAPRE1Q15691 268 aaKnown RBP11.65□□□□□ -0.55
C11orf54-214ENST00000540113 CMPK2Q5EBM0 449 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 PIK3R6Q5UE93 754 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 IL31Q6EBC2 164 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 PGM2L1Q6PCE3 622 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 CIR1Q86X95 450 aaPredicted RBP11.65□□□□□ -0.55
C11orf54-214ENST00000540113 ZNF354CQ86Y25 554 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 TTC9BQ8N6N2 239 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 SNX31Q8N9S9 440 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 ACTRT2Q8TDY3 377 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 USP13Q92995 863 aaPredicted RBP11.65□□□□□ -0.55
C11orf54-214ENST00000540113 B3GALT6Q96L58 329 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 GPR78Q96P69 363 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 ECSITQ9BQ95 431 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 DRC3Q9H069 523 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 NT5MQ9NPB1 228 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 CREBZFQ9NS37 354 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 ABCC13Q9NSE7 274 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 RAP2CQ9Y3L5 183 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 TCAF1Q9Y4C2 921 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 VWA8A3KMH1 1905 aa11.65□□□□□ -0.55
C11orf54-214ENST00000540113 STX16-NPEPL1H3BU86 382 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 CCNT2O60583 730 aaKnown RBP11.64□□□□□ -0.55
C11orf54-214ENST00000540113 HMBSP08397 361 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 STMN1P16949 149 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 CYP2C18P33260 490 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 ADRA1AP35348 466 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 PKNOX1P55347 436 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 RAB10P61026 200 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 USP46P62068 366 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 MRPS35P82673 323 aaKnown RBP11.64□□□□□ -0.55
C11orf54-214ENST00000540113 YWHAHQ04917 246 aaPredicted RBP11.64□□□□□ -0.55
C11orf54-214ENST00000540113 DSC1Q08554 894 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 CDC16Q13042 620 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 CSHL1Q14406 222 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 FSCBQ5H9T9 825 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 BRMS1LQ5PSV4 323 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 TMCO4Q5TGY1 634 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 SEL1L3Q68CR1 1132 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 IRGCQ6NXR0 463 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 SH3RF2Q8TEC5 729 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 STYXQ8WUJ0 223 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 HEXDCQ8WVB3 486 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 SREK1Q8WXA9 508 aaKnown RBP11.64□□□□□ -0.55
C11orf54-214ENST00000540113 HAPLN3Q96S86 360 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 CFHR5Q9BXR6 569 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 EBF3Q9H4W6 596 aa11.64□□□□□ -0.55
C11orf54-214ENST00000540113 NOL6Q9H6R4 1146 aaKnown RBP11.64□□□□□ -0.55
C11orf54-214ENST00000540113 RGS18Q9NS28 235 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms