RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 MAMLD1Q13495 774 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 DGCR6Q14129 220 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 FAM110CQ1W6H9 321 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 DCAF12L1Q5VU92 463 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 GPAT2Q6NUI2 795 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 FAM180AQ6UWF9 173 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 HACE1Q8IYU2 909 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 LINC01465Q8N7H1 131 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 SLC4A11Q8NBS3 891 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF606Q8WXB4 792 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 IKZF4Q9H2S9 585 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF304Q9HCX3 659 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 DNAJC11Q9NVH1 559 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 HEY1Q9Y5J3 304 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 RIPK2O43353 540 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 LGALS2P05162 132 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 ATF6P18850 670 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 ENDOUP21128 410 aaKnown RBP6.12□□□□□ -1.43
PTPRD-214ENST00000540109 OSTNP61366 133 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 SEMA3AQ14563 771 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF267Q14586 743 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-214ENST00000540109 DGKDQ16760 1214 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 PAGE2BQ5JRK9 111 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 BORAQ6PGQ7 559 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 ABRAXAS1Q6UWZ7 409 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 UNC93AQ86WB7 457 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 C19orf18Q8NEA5 215 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 FCGR1BQ92637 280 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 RORBQ92753 470 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 KAT5Q92993 513 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 TBCBQ99426 244 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 UQCC2Q9BRT2 126 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 CALN1Q9BXU9 219 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 ASNSD1Q9NWL6 643 aa6.12□□□□□ -1.43
PTPRD-214ENST00000540109 RPH3AQ9Y2J0 694 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-214ENST00000540109 MRPS7Q9Y2R9 242 aaKnown RBP6.12□□□□□ -1.43
PTPRD-214ENST00000540109 SH3D21A4FU49 640 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 H3BSA7 217 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 I3L521 148 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 PDPK1O15530 556 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 FAM189A1O60320 539 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 TGM6O95932 706 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 PIK3R1P27986 724 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ECHS1P30084 290 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 TALDO1P37837 337 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ARL4AP40617 200 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ARHGAP1Q07960 439 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 PCSK7Q16549 785 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 PDK4Q16654 411 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF284Q2VY69 593 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 NADK2Q4G0N4 442 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 DUSP28Q4G0W2 176 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 TLDC1Q6P9B6 456 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 LRRC52Q8N7C0 313 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CCDC177Q9NQR7 707 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CISHQ9NSE2 258 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 EHD3Q9NZN3 535 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 OGDHLQ9ULD0 1010 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 IRGMA1A4Y4 181 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 TRIM49D1C9J1S8 452 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 SOCS7O14512 581 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 OR6B1O95007 311 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 PABPC4LP0CB38 370 aaKnown RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CYP2C9P11712 490 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ITIH1P19827 911 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 GDI2P50395 445 aaKnown RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 MSLNQ13421 630 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 EFR3AQ14156 821 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 MOGQ16653 247 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF423Q2M1K9 1284 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 FAM117BQ6P1L5 589 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 PLEKHH3Q7Z736 793 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 OR8H3Q8N146 312 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 DHRSXQ8N5I4 330 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 FAR1Q8WVX9 515 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ATL1Q8WXF7 558 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CLPTM1LQ96KA5 538 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF560Q96MR9 790 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 APOL2Q9BQE5 337 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 C11orf70Q9BRQ4 267 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 RSPH9Q9H1X1 276 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 FKBP14Q9NWM8 211 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 AKAP7Q9P0M2 348 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 SUCOQ9UBS9 1254 aaKnown RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 HESX1Q9UBX0 185 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CDYLQ9Y232 598 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 SF3B1O75533 1304 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 SIGLEC16A6NMB1 481 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 MYO1GB0I1T2 1018 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 RNF103O00237 685 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 TRDMT1O14717 391 aaKnown RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 DFNA5O60443 496 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CD4P01730 458 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 IL32P24001 234 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 HOXD11P31277 338 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 NEK3P51956 506 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 NKX2-5P52952 324 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 MOGSQ13724 837 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CAMK1Q14012 370 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 TMEM132DQ14C87 1099 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms