RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ITGA2BP08514 1039 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 RPL14P50914 215 aaKnown RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 MGAT3Q09327 533 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 ACBD5Q5T8D3 534 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 HFE2Q6ZVN8 426 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CTU1Q7Z7A3 348 aaKnown RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 TTC30BQ8N4P2 665 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 KHSRPQ92945 711 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 OTULINQ96BN8 352 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 RNF145Q96MT1 663 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 SMOQ99835 787 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 TMEM109Q9BVC6 243 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CADM1Q9BY67 442 aaKnown RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 FAM192AQ9GZU8 254 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CNGB3Q9NQW8 809 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 ATP11BQ9Y2G3 1177 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 GABRDO14764 452 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 F9P00740 461 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 HIST1H2AGP0C0S8 130 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 FAM163BP0C2L3 166 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 HIST1H2ADP20671 130 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 GRK4P32298 578 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 ATP6V1E1P36543 226 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CHN2P52757 468 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 ADARP55265 1226 aaKnown RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 PITX1P78337 314 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 TRAF2Q12933 501 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 BLMHQ13867 455 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CYP51A1Q16850 503 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 ATP6AP1LQ52LC2 224 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 NOMO2Q5JPE7 1267 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 EMC10Q5UCC4 262 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 DCLRE1AQ6PJP8 1040 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 SLC24A5Q71RS6 500 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 MRPL10Q7Z7H8 261 aaKnown RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 STK32CQ86UX6 486 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 RCN3Q96D15 328 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CCDC126Q96EE4 140 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 HIST1H2AHQ96KK5 128 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 UROC1Q96N76 676 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CPNE1Q99829 537 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 HIST1H2AJQ99878 128 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 H2AFJQ9BTM1 129 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 BRD8Q9H0E9 1235 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 PALMDQ9NP74 551 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 MYRFQ9Y2G1 1151 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 TRIM17Q9Y577 477 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 C5orf60A6NFR6 353 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 NRP1O14786 923 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CLASP2O75122 1294 aaKnown RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 RBP1P09455 135 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 TPBGLP0DKB5 382 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 HNRNPLP14866 589 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 HLA-DPA1P20036 260 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CST5P28325 142 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 GRIA3P42263 894 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 NR2C2P49116 596 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 GAD2Q05329 585 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 ADRM1Q16186 407 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 DPYSL2Q16555 572 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 PQLC3Q8N755 202 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 RSPH1Q8WYR4 309 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 APBB2Q92870 758 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 MUC3BQ9H195 1237 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 MID1IP1Q9NPA3 183 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 A0A0A0MRY4 1105 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 ASMTLO95671 621 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 IRF1P10914 325 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 S100A5P33763 92 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 NUP107P57740 925 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 DAOAP59103 153 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 INTS6LQ5JSJ4 861 aaKnown RBP10.08□□□□□ -0.8
TRAF1-202ENST00000540010 RINLQ6ZS11 566 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 MAGEC3Q8TD91 643 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 KCTD13Q8WZ19 329 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 SPATA13Q96N96 652 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 ACBD6Q9BR61 282 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 ACE2Q9BYF1 805 aaPredicted RBP10.08□□□□□ -0.8
TRAF1-202ENST00000540010 PRDM5Q9NQX1 630 aaPredicted RBP10.08□□□□□ -0.8
TRAF1-202ENST00000540010 ARHGEF3Q9NR81 526 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 TMPRSS4Q9NRS4 437 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 TMEM161AQ9NX61 479 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 PCDHB7Q9Y5E2 793 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 A0A1W2PQ45 241 aaPredicted RBP10.08□□□□□ -0.8
TRAF1-202ENST00000540010 A0A1W2PQY0 241 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 FKTNO75072 461 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 SERPINA6P08185 405 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 GSSP48637 474 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 FOLH1Q04609 750 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 CTBP1Q13363 440 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 TAZQ16635 292 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 SLC5A9Q2M3M2 681 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 SLC39A12Q504Y0 691 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 PPM1JQ5JR12 505 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 KIAA0319Q5VV43 1072 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 RBM44Q6ZP01 1051 aaKnown RBP10.08□□□□□ -0.8
TRAF1-202ENST00000540010 FBXW8Q8N3Y1 598 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 GLMNQ92990 594 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 FAR2Q96K12 515 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 ROGDIQ9GZN7 287 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms