RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RBM38Q9H0Z9 239 aaKnown RBP12.76□□□□□ -0.37
DDX55-206ENST00000539934 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.76□□□□□ -0.37
DDX55-206ENST00000539934 A0A0G2JPF8 293 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 HNRNPCL3B7ZW38 293 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 H3BRB1 525 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 MAGEB2O15479 319 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 CYP26A1O43174 497 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 GPR37L1O60883 481 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 RPS17P08708 135 aaKnown RBP12.76□□□□□ -0.37
DDX55-206ENST00000539934 WEE2P0C1S8 567 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 HNRNPCL4P0DMR1 293 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 GFAPP14136 432 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 GALCP54803 685 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 WNT7BP56706 349 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 RAB14P61106 215 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 RAD51Q06609 339 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 ERV3-1Q14264 604 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 NFRKBQ6P4R8 1299 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 FAM71AQ8IYT1 594 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 CENPSQ8N2Z9 138 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 ACTRT2Q8TDY3 377 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 SHC3Q92529 594 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 LPPQ93052 612 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 BORCS5Q969J3 196 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 ELMO3Q96BJ8 720 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 PRICKLE1Q96MT3 831 aaPredicted RBP12.76□□□□□ -0.37
DDX55-206ENST00000539934 TMEM237Q96Q45 408 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 MMS19Q96T76 1030 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 OSBPL6Q9BZF3 934 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 SNX7Q9UNH6 387 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 ILVBLA1L0T0 632 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 FTCDO95954 541 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 C4BPAP04003 597 aaKnown RBP12.75□□□□□ -0.37
DDX55-206ENST00000539934 GLAP06280 429 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 ZCCHC18P0CG32 403 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 ABCB4P21439 1286 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 SSTR3P32745 418 aaPredicted RBP12.75□□□□□ -0.37
DDX55-206ENST00000539934 SGCGQ13326 291 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 TDRD10Q5VZ19 366 aaKnown RBP12.75□□□□□ -0.37
DDX55-206ENST00000539934 ENOSF1Q7L5Y1 443 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 HERC6Q8IVU3 1022 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 AGGF1Q8N302 714 aaeCLIP12.75□□□□□ -0.37
DDX55-206ENST00000539934 TERB1Q8NA31 727 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 TSEN2Q8NCE0 465 aaKnown RBP12.75□□□□□ -0.37
DDX55-206ENST00000539934 OLIG1Q8TAK6 271 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 TRIM63Q969Q1 353 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 CGRRF1Q99675 332 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 C16orf70Q9BSU1 422 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 TLR10Q9BXR5 811 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 COG5Q9UP83 839 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 AKT3Q9Y243 479 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 COL1A2P08123 1366 aa12.75□□□□□ -0.37
DDX55-206ENST00000539934 C15orf38-AP3S2A0A0A6YYH1 394 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 A0A0A6YYK5 440 aaPredicted RBP12.74□□□□□ -0.37
DDX55-206ENST00000539934 GRID2IPA4D2P6 1211 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 LINC01387J3KSC0 135 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 ACKR2O00590 384 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 OGTO15294 1046 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 AP1G1O43747 822 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 CABYRO75952 493 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 ALDH1A2O94788 518 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 MMP3P08254 477 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 PRKAR1AP10644 381 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 IL9P15248 144 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 PDGFRAP16234 1089 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 KCNA5P22460 613 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 CXCR5P32302 372 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 TNFSF9P41273 254 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 SCNN1GP51170 649 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 DNA2P51530 1060 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 PTENP60484 403 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 GCNT1Q02742 428 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 PRKCQQ04759 706 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 SNTA1Q13424 505 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 PDE1CQ14123 709 aaPredicted RBP12.74□□□□□ -0.37
DDX55-206ENST00000539934 EFTUD2Q15029 972 aaKnown RBP eCLIP12.74□□□□□ -0.372e-11■■■■■ 32.6
DDX55-206ENST00000539934 NCF4Q15080 339 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 ACAD11Q709F0 780 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 ERI1Q8IV48 349 aaKnown RBP12.74□□□□□ -0.37
DDX55-206ENST00000539934 EPS8L1Q8TE68 723 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 LPGAT1Q92604 370 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 DDX23Q9BUQ8 820 aaKnown RBP12.74□□□□□ -0.37
DDX55-206ENST00000539934 KLHL25Q9H0H3 589 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 CNOT10Q9H9A5 744 aaKnown RBP12.74□□□□□ -0.37
DDX55-206ENST00000539934 DIMT1Q9UNQ2 313 aaKnown RBP12.74□□□□□ -0.37
DDX55-206ENST00000539934 ERVK-19Q9WJR5 959 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 MTF2Q9Y483 593 aaPredicted RBP12.74□□□□□ -0.37
DDX55-206ENST00000539934 PTPRJQ12913 1337 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 CCDC78A2IDD5 438 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 H0Y626 953 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 K7EPI3 171 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 URODP06132 367 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 HSMCR30P0CW71 290 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 EPB42P16452 691 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 JAK1P23458 1154 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 PCP4P48539 62 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 VCPP55072 806 aaKnown RBP12.74□□□□□ -0.37
DDX55-206ENST00000539934 DGKDQ16760 1214 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms