RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 IGLON5A6NGN9 336 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 FGF10O15520 208 aaPredicted RBP15.52■□□□□ 0.08
UBE3B-211ENST00000539843 CREB3O43889 395 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 TM7SF2O76062 418 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 TMCC1O94876 653 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 FERP16591 822 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 HTR7P34969 479 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 RFC1P35251 1148 aaPredicted RBP15.52■□□□□ 0.08
UBE3B-211ENST00000539843 SUOXP51687 545 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 ZNF143P52747 638 aaPredicted RBP15.52■□□□□ 0.08
UBE3B-211ENST00000539843 ELP6Q0PNE2 266 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 INO80DQ53TQ3 878 aaPredicted RBP15.52■□□□□ 0.08
UBE3B-211ENST00000539843 ZNF542PQ5EBM4 170 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 WDR59Q6PJI9 974 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 CLEC17AQ6ZS10 378 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 SLC22A18ASQ8N1D0 253 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 PAF1Q8N7H5 531 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 FAM181AQ8N9Y4 354 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 ZNF548Q8NEK5 533 aaPredicted RBP15.52■□□□□ 0.08
UBE3B-211ENST00000539843 TPCN2Q8NHX9 752 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 MAPK15Q8TD08 544 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 KLHL32Q96NJ5 620 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 MCEEQ96PE7 176 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 C1QTNF2Q9BXJ5 285 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 TTYH3Q9C0H2 523 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 LMBRD1Q9NUN5 540 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 NDFIP2Q9NV92 336 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 LIMA1Q9UHB6 759 aaKnown RBP15.52■□□□□ 0.08
UBE3B-211ENST00000539843 SIK3Q9Y2K2 1263 aa15.52■□□□□ 0.08
UBE3B-211ENST00000539843 ADAMTS20P59510 1910 aa15.52■□□□□ 0.07
UBE3B-211ENST00000539843 URB1O60287 2271 aaKnown RBP15.51■□□□□ 0.07
UBE3B-211ENST00000539843 ATRXP46100 2492 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 POM121BA6NF01 834 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 FAM72CH0Y354 149 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 K7ESM1 405 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 AQP9O43315 295 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 GJB6O95452 261 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 JUNDP17535 347 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 EIF2S3P41091 472 aaKnown RBP15.51■□□□□ 0.07
UBE3B-211ENST00000539843 BLKP51451 505 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 YPEL5P62699 121 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 FZD2Q14332 565 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 FAM72AQ5TYM5 149 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 FAM72DQ6L9T8 149 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 ERAP2Q6P179 960 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 FAM72BQ86X60 149 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 SNIP1Q8TAD8 396 aaKnown RBP15.51■□□□□ 0.07
UBE3B-211ENST00000539843 LMX1AQ8TE12 382 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 BMFQ96LC9 184 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 AGPAT1Q99943 283 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 CNPY3Q9BT09 278 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 SLC13A1Q9BZW2 595 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 DOLKQ9UPQ8 538 aa15.51■□□□□ 0.07
UBE3B-211ENST00000539843 KNTC1P50748 2209 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 EIF3CLB5ME19 914 aaKnown RBP15.5■□□□□ 0.07
UBE3B-211ENST00000539843 TPP1O14773 563 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 EPHB6O15197 1021 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 CCP110O43303 1012 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 OPA1O60313 960 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 BRINP1O60477 761 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 GKP32189 559 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 ABL2P42684 1182 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 TPI1P60174 286 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 TBC1D25Q3MII6 688 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 ATXN7L2Q5T6C5 722 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-211ENST00000539843 BROXQ5VW32 411 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 LEKR1Q6ZMV7 388 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 RBM43Q6ZSC3 357 aaKnown RBP15.5■□□□□ 0.07
UBE3B-211ENST00000539843 MON1BQ7L1V2 547 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 VPS36Q86VN1 386 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 DNAAF5Q86Y56 855 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 ATL2Q8NHH9 583 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 IFI44Q8TCB0 444 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 SCG3Q8WXD2 468 aaKnown RBP15.5■□□□□ 0.07
UBE3B-211ENST00000539843 GRAMD1AQ96CP6 724 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 ZNF578Q96N58 590 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-211ENST00000539843 ERGIC2Q96RQ1 377 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 UBL7Q96S82 380 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-211ENST00000539843 PCDHB18PQ96TA0 734 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 LGMNQ99538 433 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 EIF3CQ99613 913 aaKnown RBP15.5■□□□□ 0.07
UBE3B-211ENST00000539843 GPR27Q9NS67 375 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 DKK3Q9UBP4 350 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 UBA2Q9UBT2 640 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-211ENST00000539843 APOBEC3BQ9UH17 382 aaKnown RBP15.5■□□□□ 0.07
UBE3B-211ENST00000539843 SALL4Q9UJQ4 1053 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 ACTL7AQ9Y615 435 aa15.5■□□□□ 0.07
UBE3B-211ENST00000539843 CPED1A4D0V7 1026 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 RASA4BC9J798 803 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 RNF103O00237 685 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 RAD51BO15315 384 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 DAPK3O43293 454 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 RASA4O43374 803 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 NEBLO76041 1014 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 CD160O95971 181 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 MBD3O95983 291 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 ANXA6P08133 673 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 HOXB3P14651 431 aaPredicted RBP15.49■□□□□ 0.07
UBE3B-211ENST00000539843 TNFAIP3P21580 790 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 HTR1BP28222 390 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms