RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MTO1Q9Y2Z2 717 aaKnown RBP22.7■■□□□ 1.22
HOMER3-204ENST00000539827 LOC285095A0A1B0GVY8 99 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 GFRA2O00451 464 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 SNX3O60493 162 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 ATXN1LP0C7T5 689 aaKnown RBP22.69■■□□□ 1.22
HOMER3-204ENST00000539827 MSLNQ13421 630 aaPredicted RBP22.69■■□□□ 1.22
HOMER3-204ENST00000539827 RGS9BPQ6ZS82 235 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 WFDC5Q8TCV5 224 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 IFT43Q96FT9 208 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 MGME1Q9BQP7 344 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 PITPNM3Q9BZ71 974 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 TREX1Q9NSU2 369 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 ANKRD65E5RJM6 399 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 GRM6O15303 877 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 LUC7L3O95232 432 aaKnown RBP22.69■■□□□ 1.22
HOMER3-204ENST00000539827 CRHR1P34998 444 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 ARCN1P48444 511 aaKnown RBP22.69■■□□□ 1.22
HOMER3-204ENST00000539827 LIMK2P53671 638 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 PDE1CQ14123 709 aaPredicted RBP22.69■■□□□ 1.22
HOMER3-204ENST00000539827 C6orf89Q6UWU4 347 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 LINGO4Q6UY18 593 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 BBS7Q8IWZ6 715 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 ARMC2Q8NEN0 867 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 TCEAL4Q96EI5 215 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 NSMCE3Q96MG7 304 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 VPS11Q9H270 941 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 NOD2Q9HC29 1040 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 MAN1C1Q9NR34 630 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 DOCK6Q96HP0 2047 aa22.69■■□□□ 1.22
HOMER3-204ENST00000539827 E2F8A0AVK6 867 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 HEATR9A2RTY3 570 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 TYW5A2RUC4 315 aaKnown RBP22.68■■□□□ 1.22
HOMER3-204ENST00000539827 GRXCR1A8MXD5 290 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 ARNTP27540 789 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 GMPRP36959 345 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 CSE1LP55060 971 aaKnown RBP22.68■■□□□ 1.22
HOMER3-204ENST00000539827 ARF5P84085 180 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 CDK18Q07002 472 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 PPM1JQ5JR12 505 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 FSTL4Q6MZW2 842 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 HTR3DQ70Z44 454 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 CMC1Q7Z7K0 106 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 SPATS2Q86XZ4 545 aaKnown RBP22.68■■□□□ 1.22
HOMER3-204ENST00000539827 ACMSDQ8TDX5 336 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 PSKH2Q96QS6 385 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 GGA2Q9UJY4 613 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 PHTF1Q9UMS5 762 aa22.68■■□□□ 1.22
HOMER3-204ENST00000539827 MTCL1Q9Y4B5 1905 aaKnown RBP22.67■■□□□ 1.22
HOMER3-204ENST00000539827 LEFTY2O00292 366 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 SERPINF2P08697 491 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 TYK2P29597 1187 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 CSKP41240 450 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 SERPINB4P48594 390 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 SCNN1BP51168 640 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 GALNT3Q14435 633 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 TSTD2Q5T7W7 516 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 ALG1LQ6GMV1 187 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 C16orf46Q6P387 395 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 FAM217AQ8IXS0 508 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 TDRD5Q8NAT2 981 aaKnown RBP22.67■■□□□ 1.22
HOMER3-204ENST00000539827 SHKBP1Q8TBC3 707 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 FEM1CQ96JP0 617 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 RANBP9Q96S59 729 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 PRKD2Q9BZL6 878 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 MTIF3Q9H2K0 278 aaKnown RBP22.67■■□□□ 1.22
HOMER3-204ENST00000539827 NEFHP12036 1026 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 EPCAMP16422 314 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 CAMK1Q14012 370 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 RFTN1Q14699 578 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-204ENST00000539827 GPR158Q5T848 1215 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 SPATA21Q7Z572 469 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 DENND6AQ8IWF6 608 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 ACVR1CQ8NER5 493 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 DDI1Q8WTU0 396 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 PTPRN2Q92932 1015 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 THOC1Q96FV9 657 aaKnown RBP22.67■■□□□ 1.22
HOMER3-204ENST00000539827 LBHD1Q9BQE6 289 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-204ENST00000539827 MANSC1Q9H8J5 431 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 CAB39LQ9H9S4 337 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 SNX15Q9NRS6 342 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 PLK2Q9NYY3 685 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 RWDD3Q9Y3V2 267 aa22.67■■□□□ 1.22
HOMER3-204ENST00000539827 USP15Q9Y4E8 981 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-204ENST00000539827 CD160O95971 181 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 PRKCGP05129 697 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 PAMP19021 973 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 BGNP21810 368 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 IRX4P78413 519 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 MPP1Q00013 466 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 CTBP1Q13363 440 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 CDH18Q13634 790 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 THOC5Q13769 683 aaKnown RBP22.66■■□□□ 1.22
HOMER3-204ENST00000539827 KIAA0930Q6ICG6 404 aaPredicted RBP22.66■■□□□ 1.22
HOMER3-204ENST00000539827 ZNF783Q6ZMS7 281 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 TPGS1Q6ZTW0 290 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 FEM1AQ9BSK4 669 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 MECRQ9BV79 373 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 SCUBE2Q9NQ36 999 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 HAUS2Q9NVX0 235 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 NSMCE4AQ9NXX6 385 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms