RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 AP5Z1O43299 807 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 TSPAN19P0C672 248 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 MATKP42679 507 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 RGS1Q08116 209 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 PWP2Q15269 919 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 UNC5AQ6ZN44 842 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ADAMTSL2Q86TH1 951 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 C12orf56Q8IXR9 622 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 CACTIN-AS1Q8N1I8 211 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 CENPIQ92674 756 aaPredicted RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 NELL1Q92832 810 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 DNAJC19Q96DA6 116 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 TEKT5Q96M29 485 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 MFSD14AQ96MC6 490 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 FAM124BQ9H5Z6 455 aaPredicted RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 NUDT14O95848 222 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 MT-CO1P00395 513 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 PROCP04070 461 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 BEX3Q00994 111 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ZDHHC20Q5W0Z9 365 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 MZT2AQ6P582 158 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 KRT77Q7Z794 578 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 COMMD2Q86X83 199 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ZFPM1Q8IX07 1006 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 MSL3Q8N5Y2 521 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 MYLPFQ96A32 169 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 RERGQ96A58 199 aaPredicted RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 CDT1Q9H211 546 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ZMYND8Q9ULU4 1186 aaPredicted RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 RIC1Q4ADV7 1423 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 WWP2O00308 870 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 GCATO75600 419 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 CCNDBP1O95273 360 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 CSNK2BP67870 215 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 BMT2Q1RMZ1 405 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 MAP1SQ66K74 1059 aaPredicted RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 POTEHQ6S545 545 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 NPNTQ6UXI9 565 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 KCNK18Q7Z418 384 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 DENND1CQ8IV53 801 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 FAM20CQ8IXL6 584 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 C8orf4Q9NR00 106 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 FAM208AQ9UK61 1670 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 SMIM35A0A1B0GVV1 85 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 IRF8Q02556 426 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 MAPKAPK3Q16644 382 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 SLC25A52Q3SY17 297 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 CCDC157Q569K6 752 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 DGKKQ5KSL6 1271 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 PMF1Q6P1K2 205 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 C16orf46Q6P387 395 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 GPR142Q7Z601 462 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 CAMK1DQ8IU85 385 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 KIAA0319LQ8IZA0 1049 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 C8orf59Q8N0T1 100 aaPredicted RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 DUSP16Q9BY84 665 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 UNKQ9C0B0 810 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 REXO4Q9GZR2 422 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 RIBC2Q9H4K1 309 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 INTS7Q9NVH2 962 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ANGPT4Q9Y264 503 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 OTCP00480 354 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ADH1AP07327 375 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ZSCAN5DPP0CG00 497 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 GRIA4P48058 902 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 COPZ1P61923 177 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 SP3Q02447 781 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ZACNQ401N2 412 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ZC3H12AQ5D1E8 599 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 SPANXN2Q5MJ10 180 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 SNX30Q5VWJ9 437 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 TPGS1Q6ZTW0 290 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 DEPDC4Q8N2C3 294 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 NACC2Q96BF6 587 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 NMD3Q96D46 503 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ALG9Q9H6U8 611 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 POLR1BQ9H9Y6 1135 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 HMG20AQ9NP66 347 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 SPAG4Q9NPE6 437 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 A0A1W2PQ67 120 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 OR6C75A6NL08 312 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 H0YC42 278 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 TEX28O15482 410 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ERN1O75460 977 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 UMPSP11172 480 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 HTR7P34969 479 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 CLK2P49760 499 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 MARSP56192 900 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 RHBDL3P58872 404 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 MIIPQ5JXC2 388 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 DOK6Q6PKX4 331 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 IKBIPQ70UQ0 350 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 MREGQ8N565 214 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 BHLHE22Q8NFJ8 381 aaPredicted RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 STK32AQ8WU08 396 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 PIK3R5Q8WYR1 880 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ITCHQ96J02 903 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 SLC38A2Q96QD8 506 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 RNF208Q9H0X6 261 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 IGFLR1Q9H665 355 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms