RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 MGME1Q9BQP7 344 aa11.25□□□□□ -0.61
CTCFL-212ENST00000539382 NAT9Q9BTE0 207 aa11.25□□□□□ -0.61
CTCFL-212ENST00000539382 KIFC1Q9BW19 673 aa11.25□□□□□ -0.61
CTCFL-212ENST00000539382 POLR1EQ9GZS1 481 aaKnown RBP11.25□□□□□ -0.61
CTCFL-212ENST00000539382 TASP1Q9H6P5 420 aa11.25□□□□□ -0.61
CTCFL-212ENST00000539382 CNOT10Q9H9A5 744 aaKnown RBP11.25□□□□□ -0.61
CTCFL-212ENST00000539382 NOD2Q9HC29 1040 aa11.25□□□□□ -0.61
CTCFL-212ENST00000539382 UBA2Q9UBT2 640 aaPredicted RBP11.25□□□□□ -0.61
CTCFL-212ENST00000539382 SLC2A6Q9UGQ3 507 aa11.25□□□□□ -0.61
CTCFL-212ENST00000539382 LSM7Q9UK45 103 aaKnown RBP11.25□□□□□ -0.61
CTCFL-212ENST00000539382 ACTL7BQ9Y614 415 aa11.25□□□□□ -0.61
CTCFL-212ENST00000539382 MYO9BQ13459 2157 aa11.25□□□□□ -0.61
CTCFL-212ENST00000539382 CCDC85CA6NKD9 419 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 K7ERQ8 282 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 USP1O94782 785 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 PRKCGP05129 697 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 HNRNPA1P09651 372 aaKnown RBP eCLIP11.24□□□□□ -0.61
CTCFL-212ENST00000539382 ATXN1LP0C7T5 689 aaKnown RBP11.24□□□□□ -0.61
CTCFL-212ENST00000539382 BMP1P13497 986 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 ARNTP27540 789 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 RPA3P35244 121 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-212ENST00000539382 AVPR1AP37288 418 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 WDR4P57081 412 aaKnown RBP11.24□□□□□ -0.61
CTCFL-212ENST00000539382 SLC1A5Q15758 541 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 SPANXN3Q5MJ09 141 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 ALG1LQ6GMV1 187 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 ESRP1Q6NXG1 681 aaKnown RBP11.24□□□□□ -0.61
CTCFL-212ENST00000539382 TMC5Q6UXY8 1006 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 RTL10Q7L3V2 364 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 TMEM25Q86YD3 366 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 CPXM2Q8N436 756 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 ARNT2Q9HBZ2 717 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 TDP1Q9NUW8 608 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 INTS9Q9NV88 658 aaKnown RBP11.24□□□□□ -0.61
CTCFL-212ENST00000539382 ZNF180Q9UJW8 692 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 LOC285095A0A1B0GVY8 99 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 TRIM49D1C9J1S8 452 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 CR2P20023 1033 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 CDH18Q13634 790 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 KCNC3Q14003 757 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 HSP90AA5PQ58FG0 334 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 SIRPB2Q5JXA9 342 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 MROH9Q5TGP6 573 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 FYB2Q5VWT5 728 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 PKN3Q6P5Z2 889 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 MFN1Q8IWA4 741 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.24□□□□□ -0.61
CTCFL-212ENST00000539382 ST13P5Q8NFI4 369 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-212ENST00000539382 DENND1AQ8TEH3 1009 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 SAMD11Q96NU1 681 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 SMIM14Q96QK8 99 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 TLE6Q9H808 572 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 VPS45Q9NRW7 570 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 VPS51Q9UID3 782 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 VPS28Q9UK41 221 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 INTS6Q9UL03 887 aaKnown RBP11.24□□□□□ -0.61
CTCFL-212ENST00000539382 GRID1Q9ULK0 1009 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 IKBKGQ9Y6K9 419 aa11.24□□□□□ -0.61
CTCFL-212ENST00000539382 HELZP42694 1942 aaKnown RBP11.24□□□□□ -0.61
CTCFL-212ENST00000539382 TNRC18O15417 2968 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-212ENST00000539382 GMNCA6NCL1 334 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 XYLBO75191 536 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 RFPL1O75677 317 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 TMCC1O94876 653 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 CD70P32970 193 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 ABCG1P45844 678 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 SCNN1BP51168 640 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 MGAT5Q09328 741 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 LMAN2Q12907 356 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 NR1H3Q13133 447 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 PCID2Q5JVF3 399 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 TEDDM1Q5T9Z0 273 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 PPP2R2DQ66LE6 453 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 RNF43Q68DV7 783 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-212ENST00000539382 PDE12Q6L8Q7 609 aaKnown RBP11.23□□□□□ -0.61
CTCFL-212ENST00000539382 MARK2Q7KZI7 788 aaKnown RBP11.23□□□□□ -0.61
CTCFL-212ENST00000539382 ARID3BQ8IVW6 561 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-212ENST00000539382 PNPLA1Q8N8W4 532 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 LMLNQ96KR4 655 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 GDF15Q99988 308 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 ZDHHC7Q9NXF8 308 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 SEPT3Q9UH03 358 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 ATXN2Q99700 1313 aaKnown RBP11.23□□□□□ -0.61
CTCFL-212ENST00000539382 E2F8A0AVK6 867 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 MAGEB16A2A368 324 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 FAM47DPA6NHR8 397 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 SMAD6O43541 496 aaKnown RBP11.23□□□□□ -0.61
CTCFL-212ENST00000539382 PFKLP17858 780 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 ARCN1P48444 511 aaKnown RBP11.23□□□□□ -0.61
CTCFL-212ENST00000539382 GALNT3Q14435 633 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 PTPRRQ15256 657 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 ZNF77Q15935 545 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 CNGA3Q16281 694 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 DUSP6Q16828 381 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 PACS1Q6VY07 963 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 ZNF783Q6ZMS7 281 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 CDHR3Q6ZTQ4 885 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 RASSF3Q86WH2 238 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 SPATS2Q86XZ4 545 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms