RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ACOT9Q9Y305 439 aa14.17□□□□□ -0.14
LIMK1-208ENST00000538333 PCDHB7Q9Y5E2 793 aa14.17□□□□□ -0.14
LIMK1-208ENST00000538333 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.17□□□□□ -0.14
LIMK1-208ENST00000538333 HEATR9A2RTY3 570 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 H0Y3Z8 333 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 ALDH2P05091 517 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 DSC2Q02487 901 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 RING1Q06587 406 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 DLG1Q12959 904 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 THOC5Q13769 683 aaKnown RBP14.16□□□□□ -0.14
LIMK1-208ENST00000538333 SEPT6Q14141 434 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 MGAT5BQ3V5L5 792 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 DNAL1Q4LDG9 190 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 RTP2Q5QGT7 225 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 LRRC8EQ6NSJ5 796 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 PGBD5Q8N414 524 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 SLC25A41Q8N5S1 370 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 MAPK15Q8TD08 544 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 PABPC5Q96DU9 382 aaKnown RBP14.16□□□□□ -0.14
LIMK1-208ENST00000538333 MYEOVQ96EZ4 313 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 DRC3Q9H069 523 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 SP110Q9HB58 689 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 RUVBL2Q9Y230 463 aaKnown RBP14.16□□□□□ -0.14
LIMK1-208ENST00000538333 SLC12A8A0AV02 714 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 AURKAO14965 403 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 TM7SF2O76062 418 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 CHRNGP07510 517 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 STMN1P16949 149 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 GLRBP48167 497 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 CD151P48509 253 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 SERPINH1P50454 418 aaKnown RBP14.16□□□□□ -0.14
LIMK1-208ENST00000538333 PRKAA2P54646 552 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 TAS2R39P59534 338 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 TCTN1Q2MV58 587 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 TSTD2Q5T7W7 516 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 SNX30Q5VWJ9 437 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 NADSYN1Q6IA69 706 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 NEPROQ6NW34 567 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 KIAA0408Q6ZU52 694 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 TMEM173Q86WV6 379 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-208ENST00000538333 CIR1Q86X95 450 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-208ENST00000538333 OR13J1Q8NGT2 312 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 ARRDC2Q8TBH0 407 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 KCNV2Q8TDN2 545 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 MOCOSQ96EN8 888 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 ZNF570Q96NI8 536 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 SEPT5Q99719 369 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-208ENST00000538333 COMMD8Q9NX08 183 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 PHF24Q9UPV7 400 aa14.16□□□□□ -0.14
LIMK1-208ENST00000538333 PAPSS2O95340 614 aaPredicted RBP14.15□□□□□ -0.14
LIMK1-208ENST00000538333 HMBSP08397 361 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 CRABP2P29373 138 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 GRIA4P48058 902 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 NUMBP49757 651 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 HTRA3P83110 453 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 IL10RBQ08334 325 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 SMARCB1Q12824 385 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 SERINC3Q13530 473 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 SLC9B1Q4ZJI4 515 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 ACBD5Q5T8D3 534 aaPredicted RBP14.15□□□□□ -0.14
LIMK1-208ENST00000538333 TDRD5Q8NAT2 981 aaKnown RBP14.15□□□□□ -0.14
LIMK1-208ENST00000538333 NXNL1Q96CM4 212 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 FAM161BQ96MY7 647 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 TSNARE1Q96NA8 513 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 CCSER2Q9H7U1 834 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 HMX1Q9NP08 348 aaPredicted RBP14.15□□□□□ -0.14
LIMK1-208ENST00000538333 XPR1Q9UBH6 696 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 RAP2CQ9Y3L5 183 aa14.15□□□□□ -0.14
LIMK1-208ENST00000538333 MROH6A6NGR9 719 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 MATN2O00339 956 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 RAMP2O60895 175 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 GALTP07902 379 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 RPSAP08865 295 aaKnown RBP14.15□□□□□ -0.15
LIMK1-208ENST00000538333 PTDSS1P48651 473 aaKnown RBP14.15□□□□□ -0.15
LIMK1-208ENST00000538333 POU4F1Q01851 419 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 ITKQ08881 620 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 DUSP4Q13115 394 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 POLD3Q15054 466 aaPredicted RBP14.15□□□□□ -0.15
LIMK1-208ENST00000538333 PARP15Q460N3 678 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 ZNF789Q5FWF6 425 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 CNSTQ6PJW8 725 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 SCUBE1Q8IWY4 988 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 FAM126BQ8IXS8 530 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.15□□□□□ -0.15
LIMK1-208ENST00000538333 ULK2Q8IYT8 1036 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 ELMO2Q96JJ3 720 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 RPRD1AQ96P16 312 aaPredicted RBP14.15□□□□□ -0.15
LIMK1-208ENST00000538333 OMDQ99983 421 aa14.15□□□□□ -0.15
LIMK1-208ENST00000538333 ILKAPQ9H0C8 392 aaPredicted RBP14.15□□□□□ -0.15
LIMK1-208ENST00000538333 SCN5AQ14524 2016 aa14.14□□□□□ -0.15
LIMK1-208ENST00000538333 LOC285095A0A1B0GVY8 99 aa14.14□□□□□ -0.15
LIMK1-208ENST00000538333 TTC24A2A3L6 582 aaPredicted RBP14.14□□□□□ -0.15
LIMK1-208ENST00000538333 NT5C1B-RDH14C9J2C7 533 aa14.14□□□□□ -0.15
LIMK1-208ENST00000538333 DLX3O60479 287 aa14.14□□□□□ -0.15
LIMK1-208ENST00000538333 TLR5O60602 858 aa14.14□□□□□ -0.15
LIMK1-208ENST00000538333 KRT36O76013 467 aa14.14□□□□□ -0.15
LIMK1-208ENST00000538333 ATXN1LP0C7T5 689 aaKnown RBP14.14□□□□□ -0.15
LIMK1-208ENST00000538333 ATF6P18850 670 aa14.14□□□□□ -0.15
LIMK1-208ENST00000538333 MPSTP25325 297 aa14.14□□□□□ -0.15
LIMK1-208ENST00000538333 GCKP35557 465 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms