RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 UBXN6Q9BZV1 441 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 S1PR5Q9H228 398 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 POMKQ9H5K3 350 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 TRPC7Q9HCX4 862 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 WDR6Q9NNW5 1121 aaKnown RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 LUC7LQ9NQ29 371 aaKnown RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 CNGB3Q9NQW8 809 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 DLL4Q9NR61 685 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 UCKL1Q9NWZ5 548 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 GDE1Q9NZC3 331 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 TRPM5Q9NZQ8 1165 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 DNMT3BQ9UBC3 853 aaKnown RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 CDH22Q9UJ99 828 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 SCML2Q9UQR0 700 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 V9GYY5 206 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 C2orf16Q68DN1 1984 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 A0A087X0T9 212 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TRAV19A0A0A6YYK7 116 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 FAM170AA1A519 330 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 SH3D21A4FU49 640 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF840PA6NDX5 716 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF839A8K0R7 811 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF891A8MT65 544 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 EFCAB8A8MWE9 144 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TMCO5BA8MYB1 307 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 GOLGA8SH3BPF8 625 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TULP2O00295 520 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CAPN9O14815 690 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 MBTPS2O43462 519 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TLR5O60602 858 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 HSF2BPO75031 334 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 FTLP02792 175 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ERBB2P04626 1255 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CYP1A1P04798 512 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CYP17A1P05093 508 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 PLEKP08567 350 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 FAM228BP0C875 321 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 MYBL1P10243 752 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 HMGA1P17096 107 aaKnown RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 GJA1P17302 382 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CEBPBP17676 345 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CHRNB2P17787 502 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 MMP8P22894 467 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 DDX6P26196 483 aaKnown RBP eCLIP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 SDHAP31040 664 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CDH5P33151 784 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 THBS2P35442 1172 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CYLC1P35663 651 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 GPD2P43304 727 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 KCNQ1P51787 676 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 MLLT6P55198 1093 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 DAOAP59103 153 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 YWHAGP61981 247 aaKnown RBP eCLIP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 YWHAZP63104 245 aaKnown RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 NOMO3P69849 1222 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 NTHL1P78549 312 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CDK17Q00537 523 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 GFPT1Q06210 699 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TBX2Q13207 712 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 GPS2Q13227 327 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 RTP5Q14D33 572 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 SMAD2Q15796 467 aaKnown RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 SEPT7Q16181 437 aaKnown RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 SLC18A3Q16572 532 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 SLC5A9Q2M3M2 681 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 PTPN20Q4JDL3 420 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ARHGAP29Q52LW3 1261 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 RAB41Q5JT25 222 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 EFHC1Q5JVL4 640 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 C10orf120Q5SQS8 335 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 HECTD3Q5T447 861 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 GPR158Q5T848 1215 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 FAM102AQ5T9C2 384 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 OR6B2Q6IFH4 312 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ACAD10Q6JQN1 1059 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 DNAJC24Q6P3W2 148 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ALKBH5Q6P6C2 394 aaKnown RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF662Q6ZS27 426 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 GAREM2Q75VX8 874 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF571Q7Z3V5 609 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TMEM110Q86TL2 294 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 PHF13Q86YI8 300 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 THNSL2Q86YJ6 484 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TMC8Q8IU68 726 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TMTC1Q8IUR5 882 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CMTM8Q8IZV2 173 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TXLNBQ8N3L3 684 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 MAB21L3Q8N8X9 362 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TC2NQ8N9U0 490 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TP53I13Q8NBR0 393 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 HIPK4Q8NE63 616 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 OR2W6PQ8NHA6 318 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ITFG1Q8TB96 612 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 RNF139Q8WU17 664 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CHAC2Q8WUX2 184 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CHTF18Q8WVB6 975 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ATXN2LQ8WWM7 1075 aaKnown RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ASB15Q8WXK1 588 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 IRGQQ8WZA9 623 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms