RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CPA4Q9UI42 421 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 STX16-NPEPL1H3BU86 382 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 NPHS1O60500 1241 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 PAGE1O75459 146 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 TADA2AO75478 443 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 HOXC8P31273 242 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 CHRNA4P43681 627 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 MRPS6P82932 125 aaKnown RBP14.48□□□□□ -0.09
USP44-203ENST00000537435 MS4A2Q01362 244 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 EIF4EBP2Q13542 120 aaPredicted RBP14.48□□□□□ -0.09
USP44-203ENST00000537435 SEPT6Q14141 434 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 MORN1Q5T089 497 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 ZNF280DQ6N043 979 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 TAF2Q6P1X5 1199 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 FAM171BQ6P995 826 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 AGMOQ6ZNB7 445 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 C2CD4AQ8NCU7 369 aaPredicted RBP14.48□□□□□ -0.09
USP44-203ENST00000537435 HEXDCQ8WVB3 486 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 SPATA16Q9BXB7 569 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 EFCAB1Q9HAE3 211 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 TREX1Q9NSU2 369 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 RBM22Q9NW64 420 aaKnown RBP eCLIP14.48□□□□□ -0.09
USP44-203ENST00000537435 NCKIPSDQ9NZQ3 722 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 SFMBT1Q9UHJ3 866 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 TBC1D30Q9Y2I9 924 aa14.48□□□□□ -0.09
USP44-203ENST00000537435 NEMP2A6NFY4 417 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 MSI1O43347 362 aaKnown RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 CTSHP09668 335 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 ODC1P11926 461 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 PAMP19021 973 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 GSTT1P30711 240 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 GRIA2P42262 883 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 BRCC3P46736 316 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 CHN2P52757 468 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 ATXN3P54252 364 aaPredicted RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 CNPY1Q3B7I2 92 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 UGT2A3Q6UWM9 527 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 TRIM67Q6ZTA4 783 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 SPNS2Q8IVW8 549 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 CCDC117Q8IWD4 279 aaPredicted RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 BHLHE22Q8NFJ8 381 aaPredicted RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 PTCD2Q8WV60 388 aaKnown RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 MAELQ96JY0 434 aaKnown RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 LRGUKQ96M69 825 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 HAPLN3Q96S86 360 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 TMEM209Q96SK2 561 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 NPAS2Q99743 824 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 MRPL57Q9BQC6 102 aaKnown RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 ACBD6Q9BR61 282 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 SUDS3Q9H7L9 328 aaPredicted RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 CATSPERBQ9H7T0 1116 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 CHST12Q9NRB3 414 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 GTSE1Q9NYZ3 720 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 FBXO5Q9UKT4 447 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 A0A087X1B8 175 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 SDHDO14521 159 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 AURKAO14965 403 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 ME2P23368 584 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 HOXC13P31276 330 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 RPL9P32969 192 aaKnown RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 SLC12A2P55011 1212 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 PURAQ00577 322 aaKnown RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 ADGRE1Q14246 886 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 CSHL1Q14406 222 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 RBM20Q5T481 1227 aaKnown RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 KIAA0930Q6ICG6 404 aaPredicted RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 CNSTQ6PJW8 725 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 METTL23Q86XA0 190 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 SCML4Q8N228 414 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 LZTR1Q8N653 840 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 HASPINQ8TF76 798 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 TMA16Q96EY4 203 aaKnown RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 FCRL2Q96LA5 508 aaPredicted RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 MRGPRX2Q96LB1 330 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 COPS7BQ9H9Q2 264 aaPredicted RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 MRM3Q9HC36 420 aaKnown RBP14.47□□□□□ -0.09
USP44-203ENST00000537435 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 FIS1Q9Y3D6 152 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 TRPV2Q9Y5S1 764 aa14.47□□□□□ -0.09
USP44-203ENST00000537435 TCAF2A6NFQ2 919 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 TRPC5OSA6NMA1 111 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 FGF10O15520 208 aaPredicted RBP14.46□□□□□ -0.09
USP44-203ENST00000537435 B3GAT3O94766 335 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 HNRNPLP14866 589 aaKnown RBP eCLIP14.46□□□□□ -0.09
USP44-203ENST00000537435 ATP5F1P24539 256 aaPredicted RBP14.46□□□□□ -0.09
USP44-203ENST00000537435 CALRP27797 417 aaKnown RBP14.46□□□□□ -0.09
USP44-203ENST00000537435 IRF5Q13568 498 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 TLR1Q15399 786 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 FSCN1Q16658 493 aaKnown RBP14.46□□□□□ -0.09
USP44-203ENST00000537435 NOMO2Q5JPE7 1267 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 BRMS1LQ5PSV4 323 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 RARS2Q5T160 578 aaKnown RBP14.46□□□□□ -0.09
USP44-203ENST00000537435 MANEALQ5VSG8 457 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 ZFP1Q6P2D0 407 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 PIWIL4Q7Z3Z4 852 aaKnown RBP14.46□□□□□ -0.09
USP44-203ENST00000537435 LRRTM3Q86VH5 581 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 CEP70Q8NHQ1 597 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 NDNQ99608 321 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 CLIC5Q9NZA1 410 aa14.46□□□□□ -0.09
USP44-203ENST00000537435 BCAP29Q9UHQ4 241 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms