RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 POLNQ7Z5Q5 900 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 VPS36Q86VN1 386 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 PSTKQ8IV42 348 aaKnown RBP16.63■□□□□ 0.25
ATL3-202ENST00000535789 ZNF564Q8TBZ8 553 aaPredicted RBP16.63■□□□□ 0.25
ATL3-202ENST00000535789 HSPH1Q92598 858 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 PANX2Q96RD6 677 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 PCDH18Q9HCL0 1135 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 AASDHPPTQ9NRN7 309 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 PCOLCE2Q9UKZ9 415 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 HPCAL4Q9UM19 191 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 EPG5Q9HCE0 2579 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 IGF2RP11717 2491 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 A0A1B0GTQ1 180 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 C16orf96A6NNT2 1141 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 KRIT1O00522 736 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 MUSKO15146 869 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 PIGNO95427 931 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 PTMAP06454 111 aaKnown RBP16.62■□□□□ 0.25
ATL3-202ENST00000535789 ITIH2P19823 946 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 SPINK2P20155 84 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 AMPD1P23109 780 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 HCAR3P49019 387 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 ARSEP51690 589 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 TAS2R40P59535 323 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 RHOAP61586 193 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 SNRPD1P62314 119 aaKnown RBP16.62■□□□□ 0.25
ATL3-202ENST00000535789 PIGHQ14442 188 aaPredicted RBP16.62■□□□□ 0.25
ATL3-202ENST00000535789 ACAP1Q15027 740 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 MYLK3Q32MK0 819 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 GCNT7Q6ZNI0 430 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 ADAT2Q7Z6V5 191 aaKnown RBP16.62■□□□□ 0.25
ATL3-202ENST00000535789 HORMAD1Q86X24 394 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 TMEM139Q8IV31 216 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 RYBPQ8N488 228 aaPredicted RBP16.62■□□□□ 0.25
ATL3-202ENST00000535789 OR8K1Q8NGG5 319 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 FAM71BQ8TC56 605 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 PPP1R16AQ96I34 528 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 GDAP1L1Q96MZ0 367 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 KLHL32Q96NJ5 620 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 CSPG4P5Q96PW8 444 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 DYRK4Q9NR20 520 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 SPTLC3Q9NUV7 552 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 TOR4AQ9NXH8 423 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 UBA2Q9UBT2 640 aaPredicted RBP16.62■□□□□ 0.25
ATL3-202ENST00000535789 ZZEF1O43149 2961 aa16.62■□□□□ 0.25
ATL3-202ENST00000535789 SSU72P8A0A1W2PR75 194 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 RAD51BO15315 384 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 SLC31A1O15431 190 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 PEX11BO96011 259 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 IL4RP24394 825 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 CCT8P50990 548 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 SIM1P81133 766 aaPredicted RBP16.61■□□□□ 0.25
ATL3-202ENST00000535789 SHC2P98077 582 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 FOXC1Q12948 553 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 ATP13A4Q4VNC1 1196 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 SETMARQ53H47 684 aaPredicted RBP16.61■□□□□ 0.25
ATL3-202ENST00000535789 ZNF805Q5CZA5 627 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 PRPF39Q86UA1 669 aaKnown RBP16.61■□□□□ 0.25
ATL3-202ENST00000535789 ZSWIM9Q86XI8 627 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 LRRC8AQ8IWT6 810 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 SLC22A18ASQ8N1D0 253 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 TEKT4Q8WW24 435 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 CASKIN2Q8WXE0 1202 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 CNTNAP3BQ96NU0 1288 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 CNTNAP3Q9BZ76 1288 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 KCNF1Q9H3M0 494 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 SLC32A1Q9H598 525 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 IP6K2Q9UHH9 426 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 TPX2Q9ULW0 747 aaKnown RBP16.61■□□□□ 0.25
ATL3-202ENST00000535789 DMTF1Q9Y222 760 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 PCDHGB2Q9Y5G2 931 aa16.61■□□□□ 0.25
ATL3-202ENST00000535789 AREL1O15033 823 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 AP1G1O43747 822 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 BUB1BO60566 1050 aaPredicted RBP16.6■□□□□ 0.25
ATL3-202ENST00000535789 POP4O95707 220 aaKnown RBP16.6■□□□□ 0.25
ATL3-202ENST00000535789 IGSF6O95976 241 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 C21orf59P57076 290 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 MMRN1Q13201 1228 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 NEK5Q6P3R8 708 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 KANSL1Q7Z3B3 1105 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 GATAD2AQ86YP4 633 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 MFSD2AQ8NA29 543 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 TSEN2Q8NCE0 465 aaKnown RBP16.6■□□□□ 0.25
ATL3-202ENST00000535789 LRIG1Q96JA1 1093 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 ELF4Q99607 663 aaPredicted RBP16.6■□□□□ 0.25
ATL3-202ENST00000535789 KLF6Q99612 283 aaPredicted RBP16.6■□□□□ 0.25
ATL3-202ENST00000535789 GPR27Q9NS67 375 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 KLHL11Q9NVR0 708 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 DMXL2Q8TDJ6 3036 aa16.6■□□□□ 0.25
ATL3-202ENST00000535789 GOLGA4Q13439 2230 aaKnown RBP16.6■□□□□ 0.25
ATL3-202ENST00000535789 TSPAN11A1L157 253 aa16.59■□□□□ 0.25
ATL3-202ENST00000535789 ARHGAP42A6NI28 874 aa16.59■□□□□ 0.25
ATL3-202ENST00000535789 PRAMEF26H0Y7S4 382 aa16.59■□□□□ 0.25
ATL3-202ENST00000535789 H3BRJ5 948 aa16.59■□□□□ 0.25
ATL3-202ENST00000535789 TLR4O00206 839 aa16.59■□□□□ 0.25
ATL3-202ENST00000535789 DFFAO00273 331 aa16.59■□□□□ 0.25
ATL3-202ENST00000535789 PCDHGA12O60330 932 aa16.59■□□□□ 0.25
ATL3-202ENST00000535789 PROSCO94903 275 aa16.59■□□□□ 0.25
ATL3-202ENST00000535789 PCDH8O95206 1070 aa16.59■□□□□ 0.25
ATL3-202ENST00000535789 EPHA8P29322 1005 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms