RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ARL13BQ3SXY8 428 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 POM121L1PQ3SYA9 428 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 C6orf132Q5T0Z8 1188 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 LINGO4Q6UY18 593 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 KDM7AQ6ZMT4 941 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 TFAP2DQ7Z6R9 452 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 IFI44Q8TCB0 444 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 LIN37Q96GY3 246 aaPredicted RBP11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 TUBGCP2Q9BSJ2 902 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 CALN1Q9BXU9 219 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 FZD3Q9NPG1 666 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 DNAJC28Q9NX36 388 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 COX16Q9P0S2 106 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 HECAQ9UBI9 543 aaPredicted RBP11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 SPASTQ9UBP0 616 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 NOCTQ9UK39 431 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 ENTPD2Q9Y5L3 495 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 FLNCQ14315 2725 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 K7ENP7 123 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 KDELR3O43731 214 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 MPOP05164 745 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 ITGA2BP08514 1039 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 TGM2P21980 687 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 EEF1GP26641 437 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 HTR7P34969 479 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 ABL2P42684 1182 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 PDX1P52945 283 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 GABREP78334 506 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 CFHR1Q03591 330 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 C1QBPQ07021 282 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 VAC14Q08AM6 782 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 SGCGQ13326 291 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 CCDC14Q49A88 953 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 TMEM52BQ4KMG9 183 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 TPRG1LQ5T0D9 272 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 BROXQ5VW32 411 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 INO80CQ6PI98 192 aaPredicted RBP11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 MACC1Q6ZN28 852 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 RBM44Q6ZP01 1051 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 ZNF605Q86T29 641 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 NOP9Q86U38 636 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 UMODL1-AS1Q8N2C9 162 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 FSTL5Q8N475 847 aaPredicted RBP11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 OR6C4Q8NGE1 309 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 WDR36Q8NI36 951 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 GRIN3AQ8TCU5 1115 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 MAPK15Q8TD08 544 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 GLMNQ92990 594 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 LGMNQ99538 433 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 TTYH3Q9C0H2 523 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 ABCG4Q9H172 646 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 TNKS2Q9H2K2 1166 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 TMPRSS4Q9NRS4 437 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 NDFIP2Q9NV92 336 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 KIF26BQ2KJY2 2108 aa11.38□□□□□ -0.59
CLSTN3-206ENST00000535668 BOD1L1Q8NFC6 3051 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 TCRBV5S1A1TA0A578 114 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 IGLON5A6NGN9 336 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 TMX2-CTNND1H3BSU7 103 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 FFAR2O15552 330 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 SRGAP2O75044 1071 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 GCATO75600 419 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 LRIG2O94898 1065 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 HOXC4P09017 264 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 UNGP13051 313 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 PNLIPP16233 465 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 JUNDP17535 347 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 MTIF2P46199 727 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 CSNK1DP48730 415 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 BLKP51451 505 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 JAM2P57087 298 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 RNASE9P60153 205 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 CDR2Q01850 454 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 PTP4A2Q12974 167 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 PDE1CQ14123 709 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 GRM3Q14832 879 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 POLD3Q15054 466 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 TRIM72Q6ZMU5 477 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 TMC6Q7Z403 805 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 PTAR1Q7Z6K3 402 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 FAM131BQ86XD5 332 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 KCNE4Q8WWG9 221 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 KLK6Q92876 244 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 CFAP57Q96MR6 1250 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 IL12RB2Q99665 862 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 SPON2Q9BUD6 331 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 C1QTNF7Q9BXJ2 289 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 NOL6Q9H6R4 1146 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 PNMA8BQ9ULN7 279 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 SNX10Q9Y5X0 201 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 FHOD1Q9Y613 1164 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 DGKBQ9Y6T7 804 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 UNC13CQ8NB66 2214 aa11.37□□□□□ -0.59
CLSTN3-206ENST00000535668 EIF3CLB5ME19 914 aaKnown RBP11.36□□□□□ -0.59
CLSTN3-206ENST00000535668 BNIP3LO60238 219 aa11.36□□□□□ -0.59
CLSTN3-206ENST00000535668 RAMP2O60895 175 aa11.36□□□□□ -0.59
CLSTN3-206ENST00000535668 NEBLO76041 1014 aa11.36□□□□□ -0.59
CLSTN3-206ENST00000535668 PRB1P04280 392 aa11.36□□□□□ -0.59
CLSTN3-206ENST00000535668 PNMA6AP0CW24 399 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-206ENST00000535668 CCKBRP32239 447 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms