RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 TOE1Q96GM8 510 aaKnown RBP13.29□□□□□ -0.28
TMEM258-202ENST00000535042 LRIG1Q96JA1 1093 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 MS4A14Q96JA4 679 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 KLHL32Q96NJ5 620 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 NUDCD1Q96RS6 583 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 OSBPL9Q96SU4 736 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 SEMA3CQ99985 751 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 CPEB1Q9BZB8 566 aaKnown RBP13.29□□□□□ -0.28
TMEM258-202ENST00000535042 NOD2Q9HC29 1040 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 WSB2Q9NYS7 404 aaPredicted RBP13.29□□□□□ -0.28
TMEM258-202ENST00000535042 SEPT10Q9P0V9 454 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 SNX12Q9UMY4 172 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 SCML1Q9UN30 329 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 FGGP02679 453 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 CD6P30203 668 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 TAS2R38P59533 333 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 AP1S1P61966 158 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 RAD51Q06609 339 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 ITKQ08881 620 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 TEX44Q53QW1 395 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 ZNF805Q5CZA5 627 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 PIP5KL1Q5T9C9 394 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 AGBL4Q5VU57 503 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 ALG1LQ6GMV1 187 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 PARS2Q7L3T8 475 aaKnown RBP13.28□□□□□ -0.28
TMEM258-202ENST00000535042 KBTBD6Q86V97 674 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 ZSWIM9Q86XI8 627 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 RASGEF1CQ8N431 466 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 DEFB119Q8N690 84 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 TTC13Q8NBP0 860 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 C1orf54Q8WWF1 131 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 HTR3CQ8WXA8 447 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 PBKQ96KB5 322 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 AGAP3Q96P47 875 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 OMDQ99983 421 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 IRF2BPLQ9H1B7 796 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 DUSP15Q9H1R2 295 aaPredicted RBP13.28□□□□□ -0.28
TMEM258-202ENST00000535042 SUV39H2Q9H5I1 410 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 USP29Q9HBJ7 922 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 SCUBE2Q9NQ36 999 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 SMARCAL1Q9NZC9 954 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 AMACRQ9UHK6 382 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 DNPEPQ9ULA0 475 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 NCKAP1Q9Y2A7 1128 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 ZKSCAN5Q9Y2L8 839 aa13.28□□□□□ -0.28
TMEM258-202ENST00000535042 BCLAF3A2AJT9 711 aaKnown RBP13.27□□□□□ -0.29
TMEM258-202ENST00000535042 C16orf96A6NNT2 1141 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 TRAFD1O14545 582 aaPredicted RBP13.27□□□□□ -0.29
TMEM258-202ENST00000535042 ZNF185O15231 689 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 MMP2P08253 660 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 TIMP2P16035 220 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 ITIH2P19823 946 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 ITGB7P26010 798 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 OXTRP30559 389 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 CD68P34810 354 aaPredicted RBP13.27□□□□□ -0.29
TMEM258-202ENST00000535042 NBL1P41271 181 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 ABL2P42684 1182 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 TRAF2Q12933 501 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 BYSLQ13895 437 aaKnown RBP13.27□□□□□ -0.29
TMEM258-202ENST00000535042 SIM2Q14190 667 aaPredicted RBP13.27□□□□□ -0.29
TMEM258-202ENST00000535042 LPAL2Q16609 132 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 LONRF2Q1L5Z9 754 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 PLK5Q496M5 336 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 PAPD7Q5XG87 772 aaKnown RBP13.27□□□□□ -0.29
TMEM258-202ENST00000535042 DARS2Q6PI48 645 aaKnown RBP13.27□□□□□ -0.29
TMEM258-202ENST00000535042 ZC3H14Q6PJT7 736 aaKnown RBP13.27□□□□□ -0.29
TMEM258-202ENST00000535042 ERN2Q76MJ5 926 aaKnown RBP13.27□□□□□ -0.29
TMEM258-202ENST00000535042 CEP68Q76N32 757 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 CDKL3Q8IVW4 592 aaPredicted RBP13.27□□□□□ -0.29
TMEM258-202ENST00000535042 ZNF567Q8N184 647 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 SPACA7Q96KW9 195 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 TEKT5Q96M29 485 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 TUBGCP5Q96RT8 1024 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 PHOX2BQ99453 314 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 GPR174Q9BXC1 333 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 OSBPL1AQ9BXW6 950 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 HDAC8Q9BY41 377 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 POLR1EQ9GZS1 481 aaKnown RBP13.27□□□□□ -0.29
TMEM258-202ENST00000535042 BTBD1Q9H0C5 482 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 FZD4Q9ULV1 537 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 TTLL3Q9Y4R7 772 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 PCDHGC4Q9Y5F7 938 aa13.27□□□□□ -0.29
TMEM258-202ENST00000535042 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 TSPAN11A1L157 253 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 C10orf142B7Z368 130 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 KCNN4O15554 427 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 SPINT1O43278 529 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 MAP3K13O43283 966 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 MTSS1O43312 755 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 LIASO43766 372 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 NEBLO76041 1014 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 MAPK8P45983 427 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 ADPRHP54922 357 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 SKOR1P84550 965 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 NHLH1Q02575 133 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 EML5Q05BV3 1969 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 BCL2L1Q07817 233 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 SNX1Q13596 522 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 GRM3Q14832 879 aa13.26□□□□□ -0.29
TMEM258-202ENST00000535042 LRRC73Q5JTD7 316 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms