RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 HDAC8Q9BY41 377 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 ZDHHC5Q9C0B5 715 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 MAGEH1Q9H213 219 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 SLC32A1Q9H598 525 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 ZWILCHQ9H900 591 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 PARVAQ9NVD7 372 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 CAPN11Q9UMQ6 739 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 TFR2Q9UP52 801 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 DAAM1Q9Y4D1 1078 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 PAXBP1Q9Y5B6 917 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 SMG1Q96Q15 3661 aaKnown RBP9.78□□□□□ -0.84
SSBP3-215ENST00000533946 MGAQ8IWI9 3026 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 A8MX80 341 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 EEF2KO00418 725 aaKnown RBP9.77□□□□□ -0.85
SSBP3-215ENST00000533946 AREL1O15033 823 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 PEX11BO96011 259 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 PRNPP04156 253 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 CELA2BP08218 269 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-215ENST00000533946 ZNF883P0CG24 379 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 THEGLP0DJG4 465 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 RARAP10276 462 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 GZMAP12544 262 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 GM2AP17900 193 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 ITGB7P26010 798 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 EPHA8P29322 1005 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-215ENST00000533946 CCT8P50990 548 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 CLCN6P51797 869 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 TPI1P60174 286 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 TEAD4Q15561 434 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 TDRD12Q587J7 1177 aaKnown RBP9.77□□□□□ -0.85
SSBP3-215ENST00000533946 ERMARDQ5T6L9 678 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 FAM46CQ5VWP2 391 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 DSG4Q86SJ6 1040 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 PRPF39Q86UA1 669 aaKnown RBP9.77□□□□□ -0.85
SSBP3-215ENST00000533946 CAMK1DQ8IU85 385 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 SFTPA2Q8IWL1 248 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 OR2AP1Q8NGE2 309 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 MDM1Q8TC05 714 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 HSPH1Q92598 858 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 VCPIP1Q96JH7 1222 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 CEP44Q9C0F1 390 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 ZMIZ1Q9ULJ6 1067 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 PCDHB9Q9Y5E1 797 aa9.77□□□□□ -0.85
SSBP3-215ENST00000533946 COL27A1Q8IZC6 1860 aaPredicted RBP9.76□□□□□ -0.85
SSBP3-215ENST00000533946 LY6G6EA0A0G2JKS1 128 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 DFFAO00273 331 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 FFAR2O15552 330 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 SLC7A4O43246 635 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 PCDHGA12O60330 932 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 PRAMEF11O60813 436 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 PROS1P07225 676 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 IGFALSP35858 605 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 NEK3P51956 506 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 ADKP55263 362 aaKnown RBP9.76□□□□□ -0.85
SSBP3-215ENST00000533946 ZBED6P86452 979 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 SLC25A11Q02978 314 aaKnown RBP9.76□□□□□ -0.85
SSBP3-215ENST00000533946 SLC10A7Q0GE19 358 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 FZD2Q14332 565 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 NFKBIBQ15653 356 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 ASTE1Q2TB18 679 aaPredicted RBP9.76□□□□□ -0.85
SSBP3-215ENST00000533946 ZNF805Q5CZA5 627 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 FIGNQ5HY92 759 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 IL27RAQ6UWB1 636 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 LRSAM1Q6UWE0 723 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 GDPD4Q6W3E5 623 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 Q6ZSR6 202 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 RFLNAQ6ZTI6 216 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 RFX8Q6ZV50 586 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 B4GALNT4Q76KP1 1039 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 POLNQ7Z5Q5 900 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 ABI3BPQ7Z7G0 1075 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 GLRX5Q86SX6 157 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 RBFAQ8N0V3 343 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 MFSD2AQ8NA29 543 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 ADAMTS14Q8WXS8 1223 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 ISG20Q96AZ6 181 aaKnown RBP9.76□□□□□ -0.85
SSBP3-215ENST00000533946 EPAS1Q99814 870 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 NUP85Q9BW27 656 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 CALN1Q9BXU9 219 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 SLC17A9Q9BYT1 436 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 PREBQ9HCU5 417 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 PCDHGB2Q9Y5G2 931 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 U3KQA8 63 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 KNTC1P50748 2209 aa9.76□□□□□ -0.85
SSBP3-215ENST00000533946 RP1P56715 2156 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 IGSF10Q6WRI0 2623 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 A0A1W2PQJ5 194 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 PRAMEF26H0Y7S4 382 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 FLRT2O43155 660 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 SIGLEC6O43699 453 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 POP4O95707 220 aaKnown RBP9.75□□□□□ -0.85
SSBP3-215ENST00000533946 GSRP00390 522 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 SERPING1P05155 500 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 CYP1A2P05177 515 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 GJC1P36383 396 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 RECQLP46063 649 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-215ENST00000533946 ARSEP51690 589 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 MAXP61244 160 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 RHOAP61586 193 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 SLC20A2Q08357 652 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms