RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 SYCE3A1L190 88 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 TMEM191CA6NGB0 347 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 IGLON5A6NGN9 336 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 EIF3CLB5ME19 914 aaKnown RBP15.66■□□□□ 0.1
CPSF1-211ENST00000533492 EEF2KO00418 725 aaKnown RBP15.66■□□□□ 0.1
CPSF1-211ENST00000533492 FPGTO14772 594 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 PRPSAP2O60256 369 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 SKILP12757 684 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 JUPP14923 745 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 CKMT2P17540 419 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 XPAP23025 273 aaPredicted RBP15.66■□□□□ 0.1
CPSF1-211ENST00000533492 ABL2P42684 1182 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 NDST2P52849 883 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 FGL2Q14314 439 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 KANSL1Q7Z3B3 1105 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 ABI3BPQ7Z7G0 1075 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 PROSER1Q86XN7 944 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 MARCH9Q86YJ5 346 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 ZNF653Q96CK0 615 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 TRIM11Q96F44 468 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 BMFQ96LC9 184 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 EIF3CQ99613 913 aaKnown RBP15.66■□□□□ 0.1
CPSF1-211ENST00000533492 NCAPGQ9BPX3 1015 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 MRPL47Q9HD33 250 aaKnown RBP15.66■□□□□ 0.1
CPSF1-211ENST00000533492 MYO1AQ9UBC5 1043 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 SCINQ9Y6U3 715 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 SPEGQ15772 3267 aa15.66■□□□□ 0.1
CPSF1-211ENST00000533492 ARID1BQ8NFD5 2236 aaPredicted RBP15.66■□□□□ 0.1
CPSF1-211ENST00000533492 POM121BA6NF01 834 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 TRABD2BA6NFA1 517 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 NEMP2A6NFY4 417 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 ARHGAP42A6NI28 874 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 DDX3XO00571 662 aaKnown RBP eCLIP15.65■□□□□ 0.1
CPSF1-211ENST00000533492 CAPNS1P04632 268 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 DGKAP23743 735 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 HNF1BP35680 557 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 RABIFP47224 123 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 ACADVLP49748 655 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 DAB2P98082 770 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 ZNF211Q13398 564 aaPredicted RBP15.65■□□□□ 0.1
CPSF1-211ENST00000533492 ILKQ13418 452 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 E4F1Q66K89 784 aaPredicted RBP15.65■□□□□ 0.1
CPSF1-211ENST00000533492 KYAT3Q6YP21 454 aaKnown RBP15.65■□□□□ 0.1
CPSF1-211ENST00000533492 SLC25A45Q8N413 288 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 PDCD7Q8N8D1 485 aaKnown RBP15.65■□□□□ 0.1
CPSF1-211ENST00000533492 MDM1Q8TC05 714 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 FNIP1Q8TF40 1166 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 TSC1Q92574 1164 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 IFT43Q96FT9 208 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 CELF6Q96J87 481 aaKnown RBP15.65■□□□□ 0.1
CPSF1-211ENST00000533492 LENG8Q96PV6 779 aaPredicted RBP15.65■□□□□ 0.1
CPSF1-211ENST00000533492 FUCA2Q9BTY2 467 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 C1QTNF2Q9BXJ5 285 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 DNAJC28Q9NX36 388 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 ITM2BQ9Y287 266 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 MFHAS1Q9Y4C4 1052 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 ASPMQ8IZT6 3477 aa15.65■□□□□ 0.1
CPSF1-211ENST00000533492 GOLGA6L19H0YKK7 550 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 TAF4O00268 1085 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 TRIM38O00635 465 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 RAD51BO15315 384 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 FFAR2O15552 330 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 SIGLEC6O43699 453 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 PIAS2O75928 621 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 MYBL1P10243 752 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 ALPPL2P10696 532 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 MIPP30301 263 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 UBASH3AP57075 661 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 HNRNPKP61978 463 aaKnown RBP eCLIP15.64■□□□□ 0.09
CPSF1-211ENST00000533492 FANCCQ00597 558 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 GRM3Q14832 879 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 CYTH1Q15438 398 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 CA9Q16790 459 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 KLHL40Q2TBA0 621 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 TDRD12Q587J7 1177 aaKnown RBP15.64■□□□□ 0.09
CPSF1-211ENST00000533492 ZNF542PQ5EBM4 170 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 PPP6R3Q5H9R7 873 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-211ENST00000533492 FIGNQ5HY92 759 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 VPS36Q86VN1 386 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 SLC22A18ASQ8N1D0 253 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 CXorf40AQ8TE69 158 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 ASB12Q8WXK4 309 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 EXOC2Q96KP1 924 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.64■□□□□ 0.09
CPSF1-211ENST00000533492 SNRNP25Q9BV90 132 aaKnown RBP15.64■□□□□ 0.09
CPSF1-211ENST00000533492 CPEB1Q9BZB8 566 aaKnown RBP15.64■□□□□ 0.09
CPSF1-211ENST00000533492 LRRC19Q9H756 370 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 CBX8Q9HC52 389 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 UCKL1Q9NWZ5 548 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 DKK3Q9UBP4 350 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 GGT7Q9UJ14 662 aa15.64■□□□□ 0.09
CPSF1-211ENST00000533492 H3BM21 787 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 J3KR12 359 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 AREL1O15033 823 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 MMP20O60882 483 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 TM7SF2O76062 418 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 TIMP2P16035 220 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 PAPOLAP51003 745 aaKnown RBP15.63■□□□□ 0.09
CPSF1-211ENST00000533492 CYP4F3Q08477 520 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 PDE1CQ14123 709 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms