RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 CDC25BP30305 580 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 HSPA9P38646 679 aaKnown RBP9.98□□□□□ -0.81
NUP98-220ENST00000533346 CTSKP43235 329 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 NUMBP49757 651 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 RENBPP51606 427 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 ATXN3P54252 364 aaPredicted RBP9.98□□□□□ -0.81
NUP98-220ENST00000533346 TAS2R40P59535 323 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 DPYSL3Q14195 570 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 AGERQ15109 404 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 SETMARQ53H47 684 aaPredicted RBP9.98□□□□□ -0.81
NUP98-220ENST00000533346 NAPEPLDQ6IQ20 393 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 TMCO3Q6UWJ1 677 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 GDPD4Q6W3E5 623 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 HORMAD1Q86X24 394 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 TMTC1Q8IUR5 882 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 TMEM145Q8NBT3 493 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 ECHDC3Q96DC8 303 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 TSGA13Q96PP4 275 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 LENG8Q96PV6 779 aaPredicted RBP9.98□□□□□ -0.81
NUP98-220ENST00000533346 SPTLC3Q9NUV7 552 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 IMPACTQ9P2X3 320 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 AMACRQ9UHK6 382 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 IPO11Q9UI26 975 aaKnown RBP9.98□□□□□ -0.81
NUP98-220ENST00000533346 ANKRD6Q9Y2G4 727 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 HS3ST3A1Q9Y663 406 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 SLCO1B1Q9Y6L6 691 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 LRRK1Q38SD2 2015 aa9.98□□□□□ -0.81
NUP98-220ENST00000533346 SHROOM3Q8TF72 1996 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 A0A1W2PQ67 120 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 DCDC2BA2VCK2 349 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 C16orf96A6NNT2 1141 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 BTNL10A8MVZ5 291 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 YKT6O15498 198 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 WNT1P04628 370 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 ADRB1P08588 477 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 MAPK8P45983 427 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 RXRGP48443 463 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 CSNK1EP49674 416 aaKnown RBP9.97□□□□□ -0.81
NUP98-220ENST00000533346 CDH6P55285 790 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 RHOAP61586 193 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 PPP2CBP62714 309 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 RPS21P63220 83 aaKnown RBP9.97□□□□□ -0.81
NUP98-220ENST00000533346 PPP2CAP67775 309 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 KIF19Q2TAC6 998 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 SMTNL2Q2TAL5 461 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 ZNF284Q2VY69 593 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 SLC45A4Q5BKX6 768 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 ANKRD20A8PQ5CZ79 823 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 ALG1LQ6GMV1 187 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 FBXL19Q6PCT2 694 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 PARS2Q7L3T8 475 aaKnown RBP9.97□□□□□ -0.81
NUP98-220ENST00000533346 GLRX5Q86SX6 157 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 OXR1Q8N573 874 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 TEX26Q8N6G2 289 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 PCDH19Q8TAB3 1148 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 HSPH1Q92598 858 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 CELF6Q96J87 481 aaKnown RBP9.97□□□□□ -0.81
NUP98-220ENST00000533346 FEM1CQ96JP0 617 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 C1QTNF2Q9BXJ5 285 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 TM6SF2Q9BZW4 377 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 MIR1-1HGQ9H1L0 117 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 GPR27Q9NS67 375 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 RALYQ9UKM9 306 aaKnown RBP9.97□□□□□ -0.81
NUP98-220ENST00000533346 ZFR2Q9UPR6 939 aaKnown RBP9.97□□□□□ -0.81
NUP98-220ENST00000533346 EPN1Q9Y6I3 576 aaPredicted RBP9.97□□□□□ -0.81
NUP98-220ENST00000533346 USP24Q9UPU5 2620 aa9.97□□□□□ -0.81
NUP98-220ENST00000533346 SPTBN2O15020 2390 aa9.96□□□□□ -0.81
NUP98-220ENST00000533346 A0A1B0GTQ1 180 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 A0A1B0GVT2 93 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 A0A1W2PQU0 124 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 FAM47DPA6NHR8 397 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 TLR4O00206 839 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 PLK4O00444 970 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 TOR1BO14657 336 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 SPINT1O43278 529 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 BNIP3LO60238 219 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 PALMO75781 387 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 CD48P09326 243 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 HNRNPA2B1P22626 353 aaKnown RBP9.96□□□□□ -0.82
NUP98-220ENST00000533346 KDELR1P24390 212 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 CCNCP24863 283 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 CYLC1P35663 651 aaPredicted RBP9.96□□□□□ -0.82
NUP98-220ENST00000533346 MAGEA1P43355 309 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 DNA2P51530 1060 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 NXPH1P58417 271 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 GALNT2Q10471 571 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 LBRQ14739 615 aaKnown RBP9.96□□□□□ -0.82
NUP98-220ENST00000533346 TAZQ16635 292 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 HLA-BQ31612 363 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 TMEM52BQ4KMG9 183 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 ATP13A4Q4VNC1 1196 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 NCBP2-AS2Q69YL0 99 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 BRAT1Q6PJG6 821 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 ABI3BPQ7Z7G0 1075 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 SRLQ86TD4 932 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 DCP2Q8IU60 420 aaKnown RBP9.96□□□□□ -0.82
NUP98-220ENST00000533346 DENND6BQ8NEG7 585 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 BAHD1Q8TBE0 780 aaPredicted RBP9.96□□□□□ -0.82
NUP98-220ENST00000533346 GRIN3AQ8TCU5 1115 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 MAML1Q92585 1016 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms