RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 CNGA3Q16281 694 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 PHKG1Q16816 387 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 SPACA7Q96KW9 195 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 KLHL32Q96NJ5 620 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 COPS8Q99627 209 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 TTYH3Q9C0H2 523 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 USP54Q70EL1 1684 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 H3BQ06 376 aaPredicted RBP15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 ITGB1P05556 798 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 GRM3Q14832 879 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 ASPSCR1Q9BZE9 553 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 ABCG4Q9H172 646 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 RUBCNLQ9H714 662 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 LRRC19Q9H756 370 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 PTPRHQ9HD43 1115 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 SCML2Q9UQR0 700 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 TCRBV7S2A1N4TA0A589 114 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 POP4O95707 220 aaKnown RBP15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 GPC1P35052 558 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 CDKN2BP42772 138 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 AARSP49588 968 aaKnown RBP eCLIP15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 CDC16Q13042 620 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 SCARA3Q6AZY7 606 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 WDR93Q6P2C0 686 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 MTSS1LQ765P7 747 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 VPS37AQ8NEZ2 397 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 SLC35F5Q8WV83 523 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 GRAMD1AQ96CP6 724 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 C17orf80Q9BSJ5 609 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 SLC39A8Q9C0K1 460 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 WDR41Q9HAD4 459 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 ZMYM5Q9UJ78 669 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 RAD54BQ9Y620 910 aa15.87■□□□□ 0.13
PPFIA1-222ENST00000532504 RASSF9O75901 435 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 TMEM110Q86TL2 294 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 CPNE8Q86YQ8 564 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 OR4K2Q8NGD2 314 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 TOX2Q96NM4 488 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 HSD3B7Q9H2F3 369 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 GNPTGQ9UJJ9 305 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 ANKRD36CQ5JPF3 1778 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 DGKAP23743 735 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 PLEKHG4Q58EX7 1191 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 PRR23BQ6ZRT6 265 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 SLC41A1Q8IVJ1 513 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 FAM126BQ8IXS8 530 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 CERS2Q96G23 380 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 EIF2S1P05198 315 aaKnown RBP15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 CRABP2P29373 138 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 MTHFRP42898 656 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 TTPAP49638 278 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 C1orf146Q5VVC0 180 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 MBLAC2Q68D91 279 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 PRPF39Q86UA1 669 aaKnown RBP15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 GBP7Q8N8V2 638 aaPredicted RBP15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 OR10G6Q8NH81 332 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 NMRAL1Q9HBL8 299 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 DZANK1Q9NVP4 752 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 PSMD12O00232 456 aaPredicted RBP15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 NBNO60934 754 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 SNAP47Q5SQN1 464 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 RRM2BQ7LG56 351 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 HAPLN2Q9GZV7 340 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 NCKIPSDQ9NZQ3 722 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 SALL4Q9UJQ4 1053 aa15.86■□□□□ 0.13
PPFIA1-222ENST00000532504 LRRC72A6NJI9 287 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 LEFTY2O00292 366 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 AIM2O14862 343 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 MT-CYBP00156 380 aaPredicted RBP15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 FAM163BP0C2L3 166 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 ALDH9A1P49189 494 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 ELP6Q0PNE2 266 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 FAM182AQ5T1J6 154 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 HDDC3Q8N4P3 179 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 PRCCQ92733 491 aaPredicted RBP15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 ANKZF1Q9H8Y5 726 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 EIF3LQ9Y262 564 aaKnown RBP15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 DDX60Q8IY21 1712 aaKnown RBP15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 F8W810 466 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 CCL22O00626 93 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 DDX6P26196 483 aaKnown RBP eCLIP15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 GHRHRQ02643 423 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 ITGA9Q13797 1035 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 LY6G5CQ5SRR4 150 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 CACHD1Q5VU97 1274 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 KCTD13Q8WZ19 329 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 PHPT1Q9NRX4 125 aaPredicted RBP15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 IMP3Q9NV31 184 aaKnown RBP15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 HCSTQ9UBK5 93 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 ERVW-1Q9UQF0 538 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 MPOP05164 745 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 CNPP09543 421 aaKnown RBP15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 KCNK10P57789 538 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 TMC3Q7Z5M5 1100 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 SLC44A2Q8IWA5 706 aaPredicted RBP15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 COLGALT2Q8IYK4 626 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 OR4L1Q8NH43 312 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 LRRC39Q96DD0 335 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 XYLT2Q9H1B5 865 aa15.85■□□□□ 0.13
PPFIA1-222ENST00000532504 ALG9Q9H6U8 611 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms