RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 KDM4CQ9H3R0 1056 aa21.07■□□□□ 0.96
CCS-207ENST00000531990 C6orf106Q9H6K1 298 aaPredicted RBP21.07■□□□□ 0.96
CCS-207ENST00000531990 EFR3BQ9Y2G0 817 aa21.07■□□□□ 0.96
CCS-207ENST00000531990 OTOGLQ3ZCN5 2332 aa21.07■□□□□ 0.96
CCS-207ENST00000531990 GPR179Q6PRD1 2367 aa21.07■□□□□ 0.96
CCS-207ENST00000531990 TBC1D3DA0A087WVF3 549 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 TBC1D3IA0A087WXS9 549 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 TBC1D3EA0A087X179 549 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 TBC1D3KA0A087X1G2 549 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 BCLAF3A2AJT9 711 aaKnown RBP21.06■□□□□ 0.96
CCS-207ENST00000531990 TBC1D3FA6NER0 549 aaPredicted RBP21.06■□□□□ 0.96
CCS-207ENST00000531990 METTL12A8MUP2 240 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 TBC1D3LB9A6J9 549 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 LRP3O75074 770 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 TBC1D3HP0C7X1 549 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 SERPINA4P29622 427 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 PTPN7P35236 360 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 MPLP40238 635 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 SCNN1BP51168 640 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 ADPRHP54922 357 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 AP1S1P61966 158 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 PPIDQ08752 370 aaKnown RBP21.06■□□□□ 0.96
CCS-207ENST00000531990 AP1B1Q10567 949 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 CFAP58Q5T655 872 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 AGBL4Q5VU57 503 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 DCAF12L1Q5VU92 463 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 TBC1D3GQ6DHY5 549 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 TBC1D3CQ6IPX1 549 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 NCEH1Q6PIU2 408 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 NPNTQ6UXI9 565 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 BBS12Q6ZW61 710 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 TBC1D3Q8IZP1 549 aaPredicted RBP21.06■□□□□ 0.96
CCS-207ENST00000531990 PAF1Q8N7H5 531 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 SNX19Q92543 992 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 MAML1Q92585 1016 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 PIGKQ92643 395 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 FAM131CQ96AQ9 280 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 HES6Q96HZ4 224 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 OLFM3Q96PB7 478 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 LGMNQ99538 433 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 ATP13A3Q9H7F0 1226 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 ANKRD36A6QL64 1941 aa21.06■□□□□ 0.96
CCS-207ENST00000531990 C16orf96A6NNT2 1141 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 INSIG1O15503 277 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 PLRG1O43660 514 aaKnown RBP21.05■□□□□ 0.96
CCS-207ENST00000531990 TJP3O95049 919 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 FSBPO95073 299 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 PYGMP11217 842 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 CCNB1P14635 433 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 RGRP47804 291 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 ITKQ08881 620 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 RALGPS1Q5JS13 557 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 PIP5KL1Q5T9C9 394 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 KIAA0895LQ68EN5 471 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 ALYREFQ86V81 257 aaKnown RBP21.05■□□□□ 0.96
CCS-207ENST00000531990 SYT12Q8IV01 421 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 TEX26Q8N6G2 289 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 ZNF641Q96N77 438 aaPredicted RBP21.05■□□□□ 0.96
CCS-207ENST00000531990 MGME1Q9BQP7 344 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 NT5MQ9NPB1 228 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 SCUBE2Q9NQ36 999 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 RBM22Q9NW64 420 aaKnown RBP eCLIP21.05■□□□□ 0.963e-16■■■■□ 21.2
CCS-207ENST00000531990 AMACRQ9UHK6 382 aa21.05■□□□□ 0.96
CCS-207ENST00000531990 TPX2Q9ULW0 747 aaKnown RBP21.05■□□□□ 0.96
CCS-207ENST00000531990 RIF1Q5UIP0 2472 aaKnown RBP21.04■□□□□ 0.96
CCS-207ENST00000531990 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.04■□□□□ 0.96
CCS-207ENST00000531990 RNF103O00237 685 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 MUSKO15146 869 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 DDX3YO15523 660 aaKnown RBP21.04■□□□□ 0.96
CCS-207ENST00000531990 ADRB3P13945 408 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 PECAM1P16284 738 aaPredicted RBP21.04■□□□□ 0.96
CCS-207ENST00000531990 XPAP23025 273 aaPredicted RBP21.04■□□□□ 0.96
CCS-207ENST00000531990 ITPKAP23677 461 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 HOXD12P35452 270 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 BCL2L1Q07817 233 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 SPEM2Q0P670 501 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 RPS6KA1Q15418 735 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 PARS2Q7L3T8 475 aaKnown RBP21.04■□□□□ 0.96
CCS-207ENST00000531990 RABEPKQ7Z6M1 372 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 GPR161Q8N6U8 529 aaKnown RBP21.04■□□□□ 0.96
CCS-207ENST00000531990 HCAR2Q8TDS4 363 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 TFB1MQ8WVM0 346 aaKnown RBP21.04■□□□□ 0.96
CCS-207ENST00000531990 RAB7BQ96AH8 199 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 NUDCD1Q96RS6 583 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 POLR1EQ9GZS1 481 aaKnown RBP21.04■□□□□ 0.96
CCS-207ENST00000531990 SUV39H2Q9H5I1 410 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 PREBQ9HCU5 417 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 SAE1Q9UBE0 346 aaPredicted RBP21.04■□□□□ 0.96
CCS-207ENST00000531990 DKK3Q9UBP4 350 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 SUSD2Q9UGT4 822 aa21.04■□□□□ 0.96
CCS-207ENST00000531990 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.04■□□□□ 0.96
CCS-207ENST00000531990 PIEZO1Q92508 2521 aa21.03■□□□□ 0.96
CCS-207ENST00000531990 EP300Q09472 2414 aaPredicted RBP21.03■□□□□ 0.96
CCS-207ENST00000531990 GON4LQ3T8J9 2241 aa21.03■□□□□ 0.96
CCS-207ENST00000531990 GOLGA6L9A6NEM1 432 aa21.03■□□□□ 0.96
CCS-207ENST00000531990 APOC4-APOC2K7ER74 178 aa21.03■□□□□ 0.96
CCS-207ENST00000531990 PIGNO95427 931 aa21.03■□□□□ 0.96
CCS-207ENST00000531990 APOC2P02655 101 aa21.03■□□□□ 0.96
CCS-207ENST00000531990 GNSP15586 552 aa21.03■□□□□ 0.96
CCS-207ENST00000531990 CES1P23141 567 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms