RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SNU13P55769 128 aaKnown RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 ACSM2AQ08AH3 577 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 C17orf67Q0P5P2 114 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 LMAN2Q12907 356 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 IL13RA2Q14627 380 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 TRADDQ15628 312 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 KRT24Q2M2I5 525 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 FAM214AQ32MH5 1076 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 KBTBD12Q3ZCT8 623 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 UBAP2Q5T6F2 1119 aaKnown RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 TEDDM1Q5T9Z0 273 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 SERTAD4-AS1Q5TG53 156 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 ACSM2BQ68CK6 577 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 PMS2CLQ68D20 193 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 DENND2CQ68D51 928 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 NAPEPLDQ6IQ20 393 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 IL20RBQ6UXL0 311 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 SLC39A5Q6ZMH5 540 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 SPATA19Q7Z5L4 167 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 RALYLQ86SE5 291 aaKnown RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 SIRT6Q8N6T7 355 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 Q8NA96 180 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 RNF169Q8NCN4 708 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 FBXO15Q8NCQ5 510 aaPredicted RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 ZNF540Q8NDQ6 660 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 NSUN7Q8NE18 718 aaKnown RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 CHST13Q8NET6 341 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 HASPINQ8TF76 798 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 MZB1Q8WU39 189 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 KCNJ9Q92806 393 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 SYAP1Q96A49 352 aaPredicted RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 EEF2KMTQ96G04 330 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 TMEM68Q96MH6 324 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 DPCDQ9BVM2 203 aaPredicted RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 WDR11Q9BZH6 1224 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 IKZF4Q9H2S9 585 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 SFXN1Q9H9B4 322 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 ENTPD7Q9NQZ7 604 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 BABAM1Q9NWV8 329 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 COMMD8Q9NX08 183 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 VSX1Q9NZR4 365 aaPredicted RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 AKAP7Q9P0M2 348 aaPredicted RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 RNF181Q9P0P0 153 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 SH3BP4Q9P0V3 963 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 DDX25Q9UHL0 483 aaKnown RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 SERTAD3Q9UJW9 196 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 APPL1Q9UKG1 709 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 LIPGQ9Y5X9 500 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 A0A1W2PRV1 198 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 TCAF2A6NFQ2 919 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 ENO4A6NNW6 628 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 QSOX1O00391 747 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SLC33A1O00400 549 aaPredicted RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SLC30A4O14863 429 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 PROM1O43490 865 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 MFAP3LO75121 409 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 RAD17O75943 681 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 STC2O76061 302 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 TPPPO94811 219 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 KAT7O95251 611 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 DDAH2O95865 285 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 HEXBP07686 556 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 RNASE1P07998 156 aaKnown RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 INHBBP09529 407 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 ZFXP17010 805 aaPredicted RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 PTPN3P26045 913 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 GSTM2P28161 218 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 NAGLUP54802 743 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SUMO2P61956 95 aaKnown RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 ASIC1P78348 528 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 TXNL4AP83876 142 aaKnown RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 CAP1Q01518 475 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 ACAP1Q15027 740 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 RNPS1Q15287 305 aaKnown RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SF3B3Q15393 1217 aaKnown RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 INAQ16352 499 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 CSRP2Q16527 193 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 ALG11Q2TAA5 492 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 WSCD2Q2TBF2 565 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 PREPLQ4J6C6 727 aaPredicted RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SFMBT2Q5VUG0 894 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 HEPHL1Q6MZM0 1159 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SERPINA13PQ6UXR4 307 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 CFAP77Q6ZQR2 320 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 PRSS45Q7RTY3 260 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 PPP1R42Q7Z4L9 355 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 CAMKMTQ7Z624 323 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 FAM160B2Q86V87 743 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 IQCHQ86VS3 1027 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 TIGD4Q8IY51 512 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 PEX5LQ8IYB4 626 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 TBC1D21Q8IYX1 336 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 ADGRG5Q8IZF4 528 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SYCP3Q8IZU3 236 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 CAMKVQ8NCB2 501 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 CNNM3Q8NE01 707 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SETD9Q8NE22 299 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 MDGA1Q8NFP4 955 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SEPT1Q8WYJ6 367 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 PTERQ96BW5 349 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms