RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 SEC14L1Q92503 715 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 FAM153AQ9UHL3 310 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 AAR2Q9Y312 384 aaKnown RBP19.28■□□□□ 0.68
SMPD1-205ENST00000531303 GOLGA6CA6NDK9 693 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 GOLGA6BA6NDN3 693 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 BHMG1C9JSJ3 638 aaPredicted RBP19.27■□□□□ 0.67
SMPD1-205ENST00000531303 STK25O00506 426 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 RNF40O75150 1001 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 SIN3BO75182 1162 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 TMEM63AO94886 807 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 KLF8O95600 359 aaPredicted RBP19.27■□□□□ 0.67
SMPD1-205ENST00000531303 EPHX1P07099 455 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 GOLGA6DP0CG33 693 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 HNRNPLP14866 589 aaKnown RBP eCLIP19.27■□□□□ 0.67
SMPD1-205ENST00000531303 VASPP50552 380 aaPredicted RBP19.27■□□□□ 0.67
SMPD1-205ENST00000531303 DRG2P55039 364 aaKnown RBP19.27■□□□□ 0.67
SMPD1-205ENST00000531303 WNT3AP56704 352 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 MTM1Q13496 603 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 KCNJ11Q14654 390 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 UBXN2BQ14CS0 331 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 GPR161Q8N6U8 529 aaKnown RBP19.27■□□□□ 0.67
SMPD1-205ENST00000531303 PAF1Q8N7H5 531 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 KDM1BQ8NB78 822 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 OR2A12Q8NGT7 310 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 PDCD6IPQ8WUM4 868 aaKnown RBP19.27■□□□□ 0.67
SMPD1-205ENST00000531303 PTPRN2Q92932 1015 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 FICDQ9BVA6 458 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 PARD6BQ9BYG5 372 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 TMEM245Q9H330 911 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 PIH1D1Q9NWS0 290 aaKnown RBP19.27■□□□□ 0.67
SMPD1-205ENST00000531303 GOLGA6AQ9NYA3 693 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 NFU1Q9UMS0 254 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 FARP1Q9Y4F1 1045 aaPredicted RBP19.27■□□□□ 0.67
SMPD1-205ENST00000531303 PCDHGC4Q9Y5F7 938 aa19.27■□□□□ 0.67
SMPD1-205ENST00000531303 EDDM13A0A1B0GTR0 161 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 PIGNO95427 931 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 AGTP01019 485 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 CES1P23141 567 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 HNRNPA1L2Q32P51 320 aaKnown RBP19.26■□□□□ 0.67
SMPD1-205ENST00000531303 SDE2Q6IQ49 451 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 HIBCHQ6NVY1 386 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-205ENST00000531303 KDELC1Q6UW63 502 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 CAMK1DQ8IU85 385 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.26■□□□□ 0.67
SMPD1-205ENST00000531303 GSPT2Q8IYD1 628 aaKnown RBP19.26■□□□□ 0.67
SMPD1-205ENST00000531303 STK40Q8N2I9 435 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 SLC25A41Q8N5S1 370 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 NAT8LQ8N9F0 302 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 GRIN3AQ8TCU5 1115 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 PRCCQ92733 491 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-205ENST00000531303 ART4Q93070 314 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 SHDQ96IW2 340 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 PWWP2AQ96N64 755 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 FSD1LQ9BXM9 530 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 FOXQ1Q9C009 403 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 NEUROG2Q9H2A3 272 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 SUN2Q9UH99 717 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 MTF2Q9Y483 593 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-205ENST00000531303 RAI2Q9Y5P3 530 aa19.26■□□□□ 0.67
SMPD1-205ENST00000531303 TP73O15350 636 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 PSMD3O43242 534 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 POP4O95707 220 aaKnown RBP19.25■□□□□ 0.67
SMPD1-205ENST00000531303 AP2A1O95782 977 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 GRIA1P42261 906 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 CSNK1DP48730 415 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 AP1S1P61966 158 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 VSNL1P62760 191 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 RAD51Q06609 339 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 BCL2L1Q07817 233 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 MPP3Q13368 585 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 CUL1Q13616 776 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 CCINQ13939 588 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 MORF4L2Q15014 288 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 TJAP1Q5JTD0 557 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 C9orf64Q5T6V5 341 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 KCTD11Q693B1 232 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 ZDHHC24Q6UX98 284 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 PPP1R21Q6ZMI0 780 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 IL17RCQ8NAC3 791 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 TXNDC5Q8NBS9 432 aaKnown RBP19.25■□□□□ 0.67
SMPD1-205ENST00000531303 RPLP0P6Q8NHW5 317 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 FBXO25Q8TCJ0 367 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 IFT43Q96FT9 208 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 MRGPRX2Q96LB1 330 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 PPP1R2P1Q96PQ5 205 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 HEPHQ9BQS7 1158 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 LRRC40Q9H9A6 602 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 CHKBQ9Y259 395 aa19.25■□□□□ 0.67
SMPD1-205ENST00000531303 MRPS17Q9Y2R5 130 aaKnown RBP19.25■□□□□ 0.67
SMPD1-205ENST00000531303 CTIFO43310 598 aaKnown RBP19.24■□□□□ 0.67
SMPD1-205ENST00000531303 CHRM1P11229 460 aaPredicted RBP19.24■□□□□ 0.67
SMPD1-205ENST00000531303 TPSB2P20231 275 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 TARSP26639 723 aaKnown RBP19.24■□□□□ 0.67
SMPD1-205ENST00000531303 NTSR1P30989 418 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 MAPK8P45983 427 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 TRAF2Q12933 501 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 E2F5Q15329 346 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 TPSAB1Q15661 275 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 POM121L1PQ3SYA9 428 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 ARSIQ5FYB1 569 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms