RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 RENBPP51606 427 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 NEK3P51956 506 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 LIMK1P53667 647 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 PPP2CBP62714 309 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 PPP2CAP67775 309 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 SLC10A2Q12908 348 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 GRM3Q14832 879 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 RSPO4Q2I0M5 234 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 ODF2Q5BJF6 829 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 NEK5Q6P3R8 708 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 FBXL19Q6PCT2 694 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 PARS2Q7L3T8 475 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 DAAM2Q86T65 1068 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 SRLQ86TD4 932 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 TRIM69Q86WT6 500 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 TXLNBQ8N3L3 684 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 ZCCHC9Q8N567 271 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 NETO1Q8TDF5 533 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 RNF25Q96BH1 459 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 KLHL32Q96NJ5 620 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 PSKH2Q96QS6 385 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 DESI2Q9BSY9 194 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 MAK16Q9BXY0 300 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 GRPEL1Q9HAV7 217 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 DKK3Q9UBP4 350 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 SEPT3Q9UH03 358 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 SLCO1B1Q9Y6L6 691 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 SHROOM3Q8TF72 1996 aa12.83□□□□□ -0.35
CCDC90B-216ENST00000529856 GOLGA6L3A6NEY3 463 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 ARHGAP33O14559 1287 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 CDX4O14627 284 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 MUSKO15146 869 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 AP1G1O43747 822 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 RNGTTO60942 597 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 ENGP17813 658 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 MX2P20592 715 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 SDHBP21912 280 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 CCNCP24863 283 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 NAP1L1P55209 391 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 GBE1Q04446 702 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 KIF5AQ12840 1032 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 TAZQ16635 292 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 IFI16Q16666 785 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 STPG1Q5TH74 334 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 MARC1Q5VT66 337 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 SLC9A4Q6AI14 798 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 MFSD7Q6UXD7 560 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 TTC7BQ86TV6 843 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 PRPF39Q86UA1 669 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 KATNAL2Q8IYT4 538 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 RCOR2Q8IZ40 523 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 PGBD5Q8N414 524 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 TEX26Q8N6G2 289 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 PLD5Q8N7P1 536 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 KIAA1524Q8TCG1 905 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 HCAR2Q8TDS4 363 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 NSMCE1Q8WV22 266 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 FATE1Q969F0 183 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 RAB7BQ96AH8 199 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 RMDN1Q96DB5 314 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 ZNF641Q96N77 438 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 TSGA13Q96PP4 275 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 TUBGCP5Q96RT8 1024 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 EDEM2Q9BV94 578 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 SUV39H2Q9H5I1 410 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 TM9SF3Q9HD45 589 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 FSCN3Q9NQT6 498 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 DTLQ9NZJ0 730 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 FADS3Q9Y5Q0 445 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 ADAMTS9Q9P2N4 1935 aa12.83□□□□□ -0.36
CCDC90B-216ENST00000529856 DOCK9Q9BZ29 2069 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 PCDH15Q96QU1 1955 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 A0A0U1RQJ8 604 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 A0A1W2PQU0 124 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 APOL1O14791 398 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 SLC30A4O14863 429 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 MATN3O15232 486 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 PCDH8O95206 1070 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 ZRANB2O95218 330 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 MAP3K6O95382 1288 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 PIGNO95427 931 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 SYPP08247 313 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 TIMP2P16035 220 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 ZFXP17010 805 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 NUDT1P36639 197 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 HSPA9P38646 679 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 CDKN2BP42772 138 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 CSNK1EP49674 416 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 SCNN1BP51168 640 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 AFF3P51826 1226 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 RACK1P63244 317 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 HNRNPDQ14103 355 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 ZNF235Q14590 738 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 TIGD7Q6NT04 549 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 SPOCD1Q6ZMY3 1216 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 HORMAD1Q86X24 394 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 RFX6Q8HWS3 928 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 CAMK1DQ8IU85 385 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 LRRC8AQ8IWT6 810 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 BBS5Q8N3I7 341 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms