RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 PHF19Q5T6S3 580 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 RETSATQ6NUM9 610 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 TMEM270Q6UE05 265 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 PARS2Q7L3T8 475 aaKnown RBP11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 SPRED1Q7Z699 444 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 TMEM110Q86TL2 294 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 PIM3Q86V86 326 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 GRAMD1CQ8IYS0 662 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 PCDH20Q8N6Y1 951 aaKnown RBP11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 Q8N9G6 341 aaPredicted RBP11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 DCAF4L2Q8NA75 395 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 GALNT11Q8NCW6 608 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 ZSWIM1Q9BR11 485 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 TNKS2Q9H2K2 1166 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 VANGL2Q9ULK5 521 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 SRPK3Q9UPE1 567 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 MTMR6Q9Y217 621 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 ABCA12Q86UK0 2595 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 PRR19A6NJB7 356 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 ZW10O43264 779 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 NUDT21O43809 227 aaKnown RBP11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 RHOCP08134 193 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 GLI1P08151 1106 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 KRT7P08729 469 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 CCL4P13236 92 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 ELAVL4P26378 380 aaKnown RBP11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 UGT1A3P35503 534 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 IGFALSP35858 605 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 ARHGEF7Q14155 803 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 C16orf72Q14CZ0 275 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 MEA1Q16626 185 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 EDRF1Q3B7T1 1238 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 EFHC2Q5JST6 749 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 ACBD5Q5T8D3 534 aaPredicted RBP11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 RESP18Q5W5W9 173 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 CAPRIN2Q6IMN6 1127 aaKnown RBP11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 CACNA2D3Q8IZS8 1091 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 GUF1Q8N442 669 aaKnown RBP11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 TEX19Q8NA77 164 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 CCDC112Q8NEF3 446 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 ATL2Q8NHH9 583 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 JPH3Q8WXH2 748 aaPredicted RBP11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 DDA1Q9BW61 102 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 SLC4A5Q9BY07 1137 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 ASPSCR1Q9BZE9 553 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 SEMA6CQ9H3T2 930 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 ST7Q9NRC1 585 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 LRIT1Q9P2V4 623 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 SERTAD1Q9UHV2 236 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 PCDHB4Q9Y5E5 795 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 HS3ST4Q9Y661 456 aa11.8□□□□□ -0.52
AMBRA1-207ENST00000529553 TRPM6Q9BX84 2022 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 DRGXA6NNA5 263 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 RNF225M0QZC1 329 aaPredicted RBP11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 AREL1O15033 823 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 NKX2-8O15522 239 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 TM7SF2O76062 418 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 CNTN5O94779 1100 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 RHOBTB3O94955 611 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 CPNE6O95741 557 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 EPB41P11171 864 aaKnown RBP11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 FGF3P11487 239 aaPredicted RBP11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 HTR1BP28222 390 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 ARSDP51689 593 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 CCNHP51946 323 aaPredicted RBP11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 B4GALNT1Q00973 533 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 MC1RQ01726 317 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 TRA2AQ13595 282 aaKnown RBP eCLIP11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 CBWD6Q4V339 395 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 ZNF805Q5CZA5 627 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 CBWD3Q5JTY5 395 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 CBWD5Q5RIA9 395 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 TCTN3Q6NUS6 607 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 LINGO4Q6UY18 593 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 ZNF783Q6ZMS7 281 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 TMPRSS9Q7Z410 1059 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 HEATR4Q86WZ0 1026 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 HID1Q8IV36 788 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 TSACCQ96A04 125 aaPredicted RBP11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 CCDC47Q96A33 483 aaKnown RBP11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 ISG20Q96AZ6 181 aaKnown RBP11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 RBM15Q96T37 977 aaKnown RBP eCLIP11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 FAM204AQ9H8W3 233 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 PRDM8Q9NQV8 689 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 DDIT4Q9NX09 232 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 USP25Q9UHP3 1055 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 DGKBQ9Y6T7 804 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 DOPEY1Q5JWR5 2465 aa11.79□□□□□ -0.52
AMBRA1-207ENST00000529553 FBN2P35556 2912 aa11.78□□□□□ -0.52
AMBRA1-207ENST00000529553 SCN8AQ9UQD0 1980 aa11.78□□□□□ -0.52
AMBRA1-207ENST00000529553 CENPEQ02224 2701 aa11.78□□□□□ -0.52
AMBRA1-207ENST00000529553 A0A0D9SEW6 157 aa11.78□□□□□ -0.52
AMBRA1-207ENST00000529553 CETN3O15182 167 aa11.78□□□□□ -0.52
AMBRA1-207ENST00000529553 ACTN4O43707 911 aaKnown RBP11.78□□□□□ -0.52
AMBRA1-207ENST00000529553 ENDOD1O94919 500 aa11.78□□□□□ -0.52
AMBRA1-207ENST00000529553 TNFP01375 233 aa11.78□□□□□ -0.52
AMBRA1-207ENST00000529553 POU3F2P20265 443 aaPredicted RBP11.78□□□□□ -0.52
AMBRA1-207ENST00000529553 BRD2P25440 801 aaKnown RBP11.78□□□□□ -0.52
AMBRA1-207ENST00000529553 MAP4P27816 1152 aaKnown RBP11.78□□□□□ -0.52
AMBRA1-207ENST00000529553 ABL2P42684 1182 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms