RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 TMEM131Q92545 1883 aa33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 EPG5Q9HCE0 2579 aa33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 H3BRJ5 948 aa33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 PRLRP16471 622 aa33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 EIF4A3P38919 411 aaKnown RBP33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 PAPOLAP51003 745 aaKnown RBP33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 CYTH1Q15438 398 aa33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 SHBQ15464 509 aa33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 SLC18A3Q16572 532 aa33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 SEL1L3Q68CR1 1132 aa33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 SPATS2Q86XZ4 545 aaKnown RBP33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 APOBEC2Q9Y235 224 aaKnown RBP33.5■■■□□ 2.95
SSSCA1-205ENST00000527920 SSU72P8A0A1W2PR75 194 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 J3KR12 359 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 MYO1FO00160 1098 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 FTH1P19P0C7X4 201 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 ARL4AP40617 200 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 MAPK8IP2Q13387 824 aaPredicted RBP33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 GRM3Q14832 879 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 NPWQ8N729 165 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 HCAR2Q8TDS4 363 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 SAP25Q8TEE9 199 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 ASB12Q8WXK4 309 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 KLHDC7BQ96G42 594 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 KLHL32Q96NJ5 620 aa33.49■■■□□ 2.95
SSSCA1-205ENST00000527920 AREL1O15033 823 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 TPM1P09493 284 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 TCF4P15884 667 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 EPHA8P29322 1005 aaPredicted RBP33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 ABL2P42684 1182 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 SLC25A11Q02978 314 aaKnown RBP33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 RFTN1Q14699 578 aaPredicted RBP33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 SMTNL2Q2TAL5 461 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 ASTE1Q2TB18 679 aaPredicted RBP33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 POLNQ7Z5Q5 900 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 RAB44Q7Z6P3 723 aaPredicted RBP33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 ABI3BPQ7Z7G0 1075 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 ADAMTS14Q8WXS8 1223 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 KLK6Q92876 244 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 SCNM1Q9BWG6 230 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 SLC17A9Q9BYT1 436 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 STAU2Q9NUL3 570 aaKnown RBP eCLIP33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 ZNHIT6Q9NWK9 470 aaKnown RBP33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 UVRAGQ9P2Y5 699 aa33.48■■■□□ 2.95
SSSCA1-205ENST00000527920 RARAP10276 462 aa33.47■■■□□ 2.95
SSSCA1-205ENST00000527920 CSNK1DP48730 415 aa33.47■■■□□ 2.95
SSSCA1-205ENST00000527920 SUOXP51687 545 aa33.47■■■□□ 2.95
SSSCA1-205ENST00000527920 IL9RQ01113 521 aa33.47■■■□□ 2.95
SSSCA1-205ENST00000527920 PRAMEF14Q5SWL7 426 aa33.47■■■□□ 2.95
SSSCA1-205ENST00000527920 RNF214Q8ND24 703 aa33.47■■■□□ 2.95
SSSCA1-205ENST00000527920 C1QTNF2Q9BXJ5 285 aa33.47■■■□□ 2.95
SSSCA1-205ENST00000527920 LCMT1Q9UIC8 334 aa33.47■■■□□ 2.95
SSSCA1-205ENST00000527920 CA5BQ9Y2D0 317 aa33.47■■■□□ 2.95
SSSCA1-205ENST00000527920 NEUROG3Q9Y4Z2 214 aa33.47■■■□□ 2.95
SSSCA1-205ENST00000527920 HS3ST3A1Q9Y663 406 aa33.47■■■□□ 2.95
SSSCA1-205ENST00000527920 SPINT1O43278 529 aa33.46■■■□□ 2.95
SSSCA1-205ENST00000527920 IL10RBQ08334 325 aa33.46■■■□□ 2.95
SSSCA1-205ENST00000527920 ZNF564Q8TBZ8 553 aaPredicted RBP33.46■■■□□ 2.95
SSSCA1-205ENST00000527920 HSPH1Q92598 858 aa33.46■■■□□ 2.95
SSSCA1-205ENST00000527920 BTBD6Q96KE9 485 aa33.46■■■□□ 2.95
SSSCA1-205ENST00000527920 LENG8Q96PV6 779 aaPredicted RBP33.46■■■□□ 2.95
SSSCA1-205ENST00000527920 CSPG4P5Q96PW8 444 aa33.46■■■□□ 2.95
SSSCA1-205ENST00000527920 RCOR3Q9P2K3 495 aaPredicted RBP33.46■■■□□ 2.95
SSSCA1-205ENST00000527920 TP53BP1Q12888 1972 aaPredicted RBP33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 TNFSF14O43557 240 aa33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 HYAL3O43820 417 aaPredicted RBP33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 DKK1O94907 266 aa33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 TOP3BO95985 862 aaKnown RBP33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 ITGAVP06756 1048 aa33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 THEGLP0DJG4 465 aa33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 FGL2Q14314 439 aa33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 TSR1Q2NL82 804 aaKnown RBP33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 GCNT7Q6ZNI0 430 aa33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 CTNNBL1Q8WYA6 563 aaPredicted RBP33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 TUBGCP5Q96RT8 1024 aa33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 SP110Q9HB58 689 aa33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 FZD3Q9NPG1 666 aa33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 ABHD10Q9NUJ1 306 aa33.45■■■□□ 2.95
SSSCA1-205ENST00000527920 TSPAN11A1L157 253 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 FAM221BA6H8Z2 402 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 DFFAO00273 331 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 NEMP1O14524 444 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 MFAP3LO75121 409 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 H2AFZP0C0S5 128 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 TMCO3Q6UWJ1 677 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 KYAT3Q6YP21 454 aaKnown RBP33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 H2AFVQ71UI9 128 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 TTC7BQ86TV6 843 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 DCP2Q8IU60 420 aaKnown RBP33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 NETO2Q8NC67 525 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 DENND6BQ8NEG7 585 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 FAM71BQ8TC56 605 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 TSC1Q92574 1164 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 EXOC2Q96KP1 924 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 ZNF641Q96N77 438 aaPredicted RBP33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 ZNF599Q96NL3 588 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 MYOCQ99972 504 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 DEF6Q9H4E7 631 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 PCDH18Q9HCL0 1135 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 GPR27Q9NS67 375 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms