RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 PARGQ86W56 976 aa22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 LENG8Q96PV6 779 aaPredicted RBP22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 OSBPL1AQ9BXW6 950 aa22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 LMBRD1Q9NUN5 540 aa22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 ITM2BQ9Y287 266 aa22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 SHROOM3Q8TF72 1996 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 ZSCAN5CA6NGD5 496 aaPredicted RBP22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 JUNDP17535 347 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 EPHB2P29323 1055 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 ABL2P42684 1182 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 COPB1P53618 953 aaKnown RBP22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 PTP4A2Q12974 167 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 CLEC16AQ2KHT3 1053 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 EFHC2Q5JST6 749 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 SASS6Q6UVJ0 657 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 PYROXD2Q8N2H3 581 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 LMX1AQ8TE12 382 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 KLF6Q99612 283 aaPredicted RBP22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 GGT7Q9UJ14 662 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 SIK3Q9Y2K2 1263 aa22.71■■□□□ 1.23
TRAPPC4-208ENST00000527680 CPED1A4D0V7 1026 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 SIGLEC16A6NMB1 481 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 CREB3O43889 395 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 NME1P15531 152 aaKnown RBP22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 THOP1P52888 689 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 UBXN1Q04323 297 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 LRRC73Q5JTD7 316 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 PHF13Q86YI8 300 aaPredicted RBP22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 FAM181AQ8N9Y4 354 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 NETO2Q8NC67 525 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 C3orf20Q8ND61 904 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 ZNF548Q8NEK5 533 aaPredicted RBP22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 MAPK15Q8TD08 544 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 NTAN1Q96AB6 310 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 GDAP1L1Q96MZ0 367 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 BBC3Q96PG8 261 aaPredicted RBP22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 DEPDC7Q96QD5 511 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 IL12RB2Q99665 862 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 USP29Q9HBJ7 922 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 PCDHB1Q9Y5F3 818 aa22.7■■□□□ 1.22
TRAPPC4-208ENST00000527680 FASNP49327 2511 aaKnown RBP22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 AQP9O43315 295 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 MMP20O60882 483 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 TMCC1O94876 653 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 IGSF6O95976 241 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 GP1BAP07359 652 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 XPAP23025 273 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 RHOAP61586 193 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 CCDC173Q0VFZ6 552 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 PTK2BQ14289 1009 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 CDKN3Q16667 212 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 ZCCHC8Q6NZY4 707 aaKnown RBP22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 DNAJC24Q6P3W2 148 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 VPS36Q86VN1 386 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 IFI44Q8TCB0 444 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 CXorf40AQ8TE69 158 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 ASB12Q8WXK4 309 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 AGPAT1Q99943 283 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 TTYH3Q9C0H2 523 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 GPR27Q9NS67 375 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 KLF15Q9UIH9 416 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 CSNK1G3Q9Y6M4 447 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 CHD5Q8TDI0 1954 aa22.69■■□□□ 1.22
TRAPPC4-208ENST00000527680 TM7SF2O76062 418 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 DESP17661 470 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 DEFB133Q30KQ1 61 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 DCUN1D2Q6PH85 259 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 RTL3Q8N8U3 475 aaKnown RBP22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 DENND6BQ8NEG7 585 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 SNIP1Q8TAD8 396 aaKnown RBP22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 BTN2A2Q8WVV5 523 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 CASKIN2Q8WXE0 1202 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 EPAS1Q99814 870 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 C1QTNF7Q9BXJ2 289 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 CATSPERBQ9H7T0 1116 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 ANO10Q9NW15 660 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 SPASTQ9UBP0 616 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 NEU3Q9UQ49 428 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 RAI2Q9Y5P3 530 aa22.68■■□□□ 1.22
TRAPPC4-208ENST00000527680 SPINT1O43278 529 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 CCP110O43303 1012 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 USP12O75317 370 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 CSO75390 466 aaKnown RBP22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 MPOP05164 745 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 ZNF143P52747 638 aaPredicted RBP22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 GSCP56915 257 aaPredicted RBP22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 YBEYP58557 167 aaPredicted RBP22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 PFN3P60673 137 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 TBC1D25Q3MII6 688 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 INO80DQ53TQ3 878 aaPredicted RBP22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 FAXCQ5TGI0 409 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 CENPTQ96BT3 561 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 HMCESQ96FZ2 354 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 MCEEQ96PE7 176 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 NCAPGQ9BPX3 1015 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 NCKIPSDQ9NZQ3 722 aa22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 LIMA1Q9UHB6 759 aaKnown RBP22.67■■□□□ 1.22
TRAPPC4-208ENST00000527680 LGALS16A8MUM7 142 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 RASA4BC9J798 803 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 AREL1O15033 823 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms